RNA id: TU69571


Basic Information

Item Value
RNA id TU69571
length 556
RNA type TUCP
GC content 0.55
exon number 2
gene id G46926
representative True

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 20529179 ~ 20531834 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGACGCATGGGAACTGAGCAAAAACGGTGGATTCGACATTTTCAACGGCGATATATATCAAGAGTTCAGTTACGAGAGTGTTTTGCAAACCGGCTTGTTTTGGGGAGGTTGGGGGGGGGAGGCTTTTCCGATTTCCAGGTCGCCCTACAGCGGCCGGCGCATCCCAGAGATTTTGCAAGTTGCCCAGGCTAAAAAAATCCCGAAAGCCAAGCGCCGCGAATGTTCATCTTCCGAGTTCCCGACGATCCCGAACGTAATTCCGCCGTCGGTGCGACCAAAACACAGCGCGCACGGGAAGAGTTTCCTCCCAAACAAGTAACCCTTTCCTCGGGCAAATGTCCACGGCTCGTTCCAGCAAGAGGCGATCCGGTCCTTCAAGCCGTCTTTTGGTCACCCGCCGACGGATCTGGACAGACCGAGCAGCATAATGCCTGGCGTGATTTTCTGCGCCCTTTCCTCGCGTCCGTGGGTCTGATCGCCGGACAGTTTCACGGATCCGTGACTGACCTCAAAGCAGCTGGAAAAGCAAGTGGTTGGAAATGGGAGGGATTGGAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69504 lncRNA downstream 106449 20419765 ~ 20422730 (-) True G46883
TU69494 lncRNA downstream 109584 20360821 ~ 20419595 (-) False G46881
TU69493 lncRNA downstream 109584 20408987 ~ 20419595 (-) False G46881
TU69492 lncRNA downstream 109584 20415236 ~ 20419595 (-) False G46881
TU69497 lncRNA downstream 109584 20415236 ~ 20419595 (-) True G46881
TU69574 lncRNA upstream 22199 20554033 ~ 20599135 (-) True G46929
TU69588 lncRNA upstream 32517 20564351 ~ 20706043 (-) False G46934
TU69596 lncRNA upstream 32517 20564351 ~ 20706043 (-) False G46934
TU69597 lncRNA upstream 32517 20564351 ~ 20706043 (-) False G46934
TU69600 lncRNA upstream 32517 20564351 ~ 20706043 (-) True G46934
XM_043242618.1 mRNA downstream 98002 20423711 ~ 20431177 (-) True hemk1
XM_043242486.1 mRNA downstream 290519 20237274 ~ 20238660 (-) True LOC122347299
XM_043241466.1 mRNA downstream 403918 20116875 ~ 20125261 (-) True slc6a22.1
XM_043242173.1 mRNA downstream 426720 20096024 ~ 20102459 (-) False srsf3a
XM_043242175.1 mRNA downstream 429369 20096024 ~ 20099810 (-) True srsf3a
XM_043242842.1 mRNA upstream 250610 20782444 ~ 20786555 (-) True cav3
XM_043241340.1 mRNA upstream 263412 20795246 ~ 20799151 (-) True gpr61l
XM_043242971.1 mRNA upstream 268260 20800094 ~ 20805651 (-) True parp3
XM_043242943.1 mRNA upstream 274929 20806763 ~ 20841391 (-) False grm2a
XM_043242944.1 mRNA upstream 274929 20806763 ~ 20841082 (-) False grm2a
TU69405 other downstream 362900 20161440 ~ 20166279 (-) True G46840
XR_006251194.1 other downstream 426721 20096389 ~ 20102458 (-) False srsf3a
TU69304 other downstream 681781 19843044 ~ 19847398 (-) True tspo
unassigned_transcript_1266 other downstream 862673 19666434 ~ 19666506 (-) True trnaf-gaa
TU68985 other downstream 973248 19553319 ~ 19555931 (-) False tsfm
XR_006251209.1 other upstream 2208138 22739972 ~ 22750947 (-) False tardbpb
XR_006251207.1 other upstream 2208138 22739972 ~ 22750947 (-) False tardbpb
XR_006251208.1 other upstream 2208138 22739972 ~ 22750947 (-) False tardbpb
XR_006251206.1 other upstream 2208138 22739972 ~ 22750947 (-) False tardbpb
XR_006251205.1 other upstream 2212428 22744262 ~ 22750947 (-) True tardbpb

Expression Profile