RNA id: XM_043240988.1


Basic Information

Item Value
RNA id XM_043240988.1
length 2937
RNA type mRNA
GC content 0.45
exon number 10
gene id znf207b
representative False

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10146224 ~ 10152064 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCCGCTGCATTGTGGGTGAAGAGACTTCAGCGGAGCCGcgccatttttttgtgtgtgttccgACCTGAAATCAAAAAGCTGCGTTTGGTGACGGTTAGATTCCCGAATTGAATTCCTCTCCTGTCGGTTTGGAAGACAGTAACGAGTTATTAGAATGGGacggaagaagaagaagcagatgAAGCCCTGGTGCTGGTATTGCAACAGAGATTTCGATGATGAAAAGATTCTCATTCAGCACCAAAAAgccaaacatttcaaatgtcataTATGTCACAAGAAGCTGTACACAGGACCTGGATTAGCCATACACTGCATGCAGGTGCACAAAGAAACAATAGATGCTGTTCCTAATGCTATACCGGGAAGAACAGATATTGAATTGGAAATCTACGGCATGGAGGGTATTCCAGACAAAGACATGCAAGATCGGAGAAGAGTACTTGAACAAAAGTCACAAGATAGTCAGAAGAAGAAGCAGAACCAGGATGATtctgatgaagatgatgatgatgatgatgatgatgaagctgGACCTTCGTCGTTTCAGCAGCCTGTTGCTCAGCCTCCGGCTGCCTACATGCCCCCAATGACCCAGGCAGGCATGCATCCTGGTCCTCTGGGCCAAGGCATGCCACACACTGGTTATGCAGGCATGCCACCTATGTTGACTGGTGTCCCACCAATGATTCCTGGTATGCCGCCAGTAATTCCAGGCATGCCACCTGGTATGATGCCAATGGGAGGGATGATGCCCCCAGGTCCAGCAATGCCTCATATGATGGCCGGCATGCCACCAGgAATGCCCCCTCATGTTGCCCGTCCTGGCATGCCTCCTATGGCACCCGCCGCCCCAGTCACAGCTCCTGGAATGGCCAGTAGACCGGCTGTACCCGCCACACAAACTGCTGCATCCAAACCTCTCTTCCCCAGCGCTGTGCAGGCGCAGCAGACTGTATCAGGAGCGCCGTCAGCCCCCTCTGACTCCCCTAAGGTGACATTCCCAGCCTACACGCAGCCTTCCTCCACTCCCTCTGTTGCTGCCTCCTCCAGCACTGTGGCCAAGCCCCCTGCCACAGTCACAAGTAAGCCAGCCACCCTCACCACCTTGAGTGCTACCAGTAAGTTGATGCACCCTGATGAGGATATCTCGCTGGAAGAGAGACGGGCTCAGCTGCCTAGGTACCAGAGGCTAATCCCTCGGCCTGGGCAGACTGCTGCAGCTGGTGGAGCGGTGGGAGGAATGATCCCTGCCCAGCAGGTCATACCTCCTCAGCAGCCTGGAATGAGGCATCCCATACATGGTCAGTATGGTGGTCCTCCACAGGGCATGCCTGGTTATATGGGTGGTGGCATGCCTCCTTATGGACAGAGTGCCCCCATGGTGCCCCCATACCAAGCTGGCCCTCCAGGGCCTCCCATGGGCATAAGGCCACCTGTAATGTCTCCAGGCAGCCGGTACTGAAACGGCCCTGTCGTCCCACTAGGTTTGGAGGTTAAACCTTTTCTCATCTTGTGCTTTTAATGTAGCCAAACCAATGAGCTCTAAACCCACTGCTGAAGAAAAACTGCATACTGGACATTTGAGATATATAATATCACACACGAGTTTTGGATTCAGCCCttaaataaagacaaagaagATAACAGCAGTATCAATGTCACAGTTGATACATGTATTGCTTTTCTTCCTATTGTGTTTCATTCAGGTTGTACAAGTACAGTATATTAGACAAAGGTTCATAATATATTGAAGCCGCTGGCCTAACAGTATCTCCATACTCAAGGCAAGTTCCCAGTAAGATTTCTGCTTTTATCTTCGTAGTGAAGCCCTCACAGCACCATACTGTGCTGTTGGACTTTACGTCCCCAACATCAGCTTGGTGAGGGCTTCAGATCACTGTTGTcatgttgctttttgtttttcttttaactgtTTGCATCCATATATTCAGGGTTTAAATAGCACAAGGGTTCATGtgtctttctgtatttttttctttatgtattgtaataaaacatacttaatttgatttttttttttttttttttttttcttgattgtttttgtgtgagtgtgtttccTGAACCGTGGAGTCTTCAGGCAGGTTGGTTTTCTTGATAAAGCCATAATGACGTTACAAATACACTCGCTCTGTCAGTAACAAGTTCTGGTATGTTCTTAAAGGTATTTGGTGTTAACACCATAAAGTCATTTATagtaagaaaacaaaagtaaagcCCTAATCACAGCTTAACATTTTATCAGATGTTAAATGATCCCTTTTGTTGCTTGATAACCTAGTTGCATGAATGATCTTTCCAGATGTTGGATTTAAGATTCACGAAACATTTGTGACATGCTTGATTGATATTTCTCAGTTACCAGTATTAAATTGGTACAATGGCTTGGAAGCATTTCCTGGTCTGCAGGTAAGAGCCACTGTGTGAATTACCTTGTAAAGAATCAgattttattgcatgtttttctatttcaaCCATggtcttacttttttttttaatcgtgtAATGAATTGACCAGAAACTGTTTTGGCTAAGACAGCAGGAAAAATaagctcaaataaaataaagatatttaaccAGTAGATAATTTGCCAGACAGTCACACTATTAACAAGTAACATCTGTATTCACATTATCTGTCAGACGTCTAGTGCCCTTAAATCAGGGGTTTGCCAACCCTGCAGTTGAAGAGCTACTGTCTTAGTTTAGTTTCATCCCCATGTCAAGACGCCGTGACCATGATGGGGTTTCATCTTTCCTTCCCAGTTCACTGTTATTTGAAAGGGAAAAAGTTCTATATTTATTGCTAAGACGTCATGAAAATTCAGTGCTGAAACGCTGATCTACAAAGATTTATAGCAGAAAGGTTTGCACTGTGATGttacaaatgtgaaataaactTCTGTATTCTAA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU65386 lncRNA downstream 1077 10138905 ~ 10145147 (-) True cd7al
TU65311 lncRNA downstream 48045 10097980 ~ 10098179 (-) True G44105
TU65294 lncRNA downstream 61949 10083990 ~ 10084275 (-) True G44095
TU65251 lncRNA downstream 128156 10013936 ~ 10018068 (-) True G44065
TU65223 lncRNA downstream 197239 9945667 ~ 9948985 (-) False anapc11
TU65412 lncRNA upstream 86356 10238419 ~ 10238618 (-) True G44167
TU65413 lncRNA upstream 90147 10242210 ~ 10242509 (-) True G44168
TU65408 lncRNA upstream 90641 10242704 ~ 10243401 (-) False tnrc6c2
TU65477 lncRNA upstream 203951 10356014 ~ 10356314 (-) False LOC122347367
TU65479 lncRNA upstream 220577 10372640 ~ 10372852 (-) True G44208
XM_043240992.1 mRNA downstream 1056 10141747 ~ 10145168 (-) False cd7al
XM_043240990.1 mRNA downstream 19483 10123815 ~ 10126741 (-) True tefm
XM_043241684.1 mRNA downstream 39416 10101483 ~ 10106808 (-) True utp6
XM_043242427.1 mRNA downstream 97367 10039427 ~ 10048857 (-) False trim25
XM_043242579.1 mRNA upstream 15173 10167236 ~ 10202756 (-) False rhbdl3
XM_043242580.1 mRNA upstream 15173 10167236 ~ 10202754 (-) True rhbdl3
XM_043242584.1 mRNA upstream 15173 10167236 ~ 10202751 (-) False rhbdl3
XM_043242582.1 mRNA upstream 15173 10167236 ~ 10202750 (-) False rhbdl3
XM_043242583.1 mRNA upstream 15173 10167236 ~ 10183937 (-) False rhbdl3
TU65385 other downstream 1077 10141611 ~ 10145147 (-) False cd7al
TU65247 other downstream 118589 10025578 ~ 10027635 (-) False c6h17orf67
TU65030 other downstream 873919 9271418 ~ 9272305 (-) True G43900
TU65029 other downstream 875302 9269188 ~ 9270922 (-) True G43899
TU65026 other downstream 878900 9266002 ~ 9267324 (-) True G43896
TU65678 other upstream 557982 10710045 ~ 10716741 (-) True G44358
XR_006251151.1 other upstream 902972 11055035 ~ 11069458 (-) False brdt
XR_006251152.1 other upstream 902972 11055035 ~ 11069457 (-) False brdt
unassigned_transcript_1087 other upstream 1820417 11972480 ~ 11972551 (-) True trnag-ucc_1
unassigned_transcript_1088 other upstream 1820646 11972709 ~ 11972780 (-) True trnap-ugg_4

Expression Profile