Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043241041.1 |
| length | 1250 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC122346430 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056704.1 |
| NCBI id | CM032073.1 |
| chromosome length | 27473687 |
| location | 17668187 ~ 17669843 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0021794 | thalamus development | biological_process |
| GO:0007219 | Notch signaling pathway | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0001757 | somite specification | biological_process |
| GO:0045664 | regulation of neuron differentiation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| id | description |
|---|---|
| K06054 | HES1; hairy and enhancer of split 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU67995 | lncRNA | downstream | 149582 | 17514638 ~ 17518605 (-) | True | G45930 |
| TU67974 | lncRNA | downstream | 254048 | 17413038 ~ 17414139 (-) | False | brinp3a.2 |
| TU67960 | lncRNA | downstream | 421818 | 17243680 ~ 17246369 (-) | False | LOC122347244 |
| TU67946 | lncRNA | downstream | 480393 | 17187456 ~ 17187794 (-) | True | G45897 |
| TU67746 | lncRNA | downstream | 1345382 | 16320413 ~ 16322805 (-) | True | G45770 |
| TU68086 | lncRNA | upstream | 137778 | 17807621 ~ 17808115 (-) | True | G45993 |
| TU68093 | lncRNA | upstream | 152693 | 17822536 ~ 17822735 (-) | True | G46000 |
| XR_006251164.1 | lncRNA | upstream | 370521 | 18040364 ~ 18044630 (-) | False | LOC122346731 |
| XR_006251163.1 | lncRNA | upstream | 372804 | 18042647 ~ 18044630 (-) | True | LOC122346731 |
| XR_006251165.1 | lncRNA | upstream | 392938 | 18062781 ~ 18066949 (-) | True | LOC122346732 |
| XM_043241039.1 | mRNA | downstream | 112948 | 17553503 ~ 17555239 (-) | True | LOC122346427 |
| XM_043242382.1 | mRNA | downstream | 254101 | 17382327 ~ 17414086 (-) | True | brinp3a.2 |
| XM_043242414.1 | mRNA | downstream | 421801 | 17235790 ~ 17246386 (-) | True | LOC122347244 |
| XM_043242413.1 | mRNA | downstream | 443277 | 17217987 ~ 17224910 (-) | True | LOC122347243 |
| XM_043240971.1 | mRNA | downstream | 741819 | 16898685 ~ 16926368 (-) | False | brinp3a.1 |
| XM_043241931.1 | mRNA | upstream | 73872 | 17743715 ~ 17774106 (-) | False | opa1 |
| XM_043241930.1 | mRNA | upstream | 73872 | 17743715 ~ 17774106 (-) | False | opa1 |
| XM_043241932.1 | mRNA | upstream | 73872 | 17743715 ~ 17774106 (-) | False | opa1 |
| XM_043241929.1 | mRNA | upstream | 73872 | 17743715 ~ 17774106 (-) | False | opa1 |
| XM_043241928.1 | mRNA | upstream | 73872 | 17743715 ~ 17774106 (-) | False | opa1 |
| TU67962 | other | downstream | 359709 | 17307815 ~ 17308478 (-) | True | G45910 |
| TU67944 | other | downstream | 480869 | 17186689 ~ 17187318 (-) | True | G45895 |
| TU67937 | other | downstream | 837979 | 16816640 ~ 16830208 (-) | True | rgs8 |
| TU67772 | other | downstream | 1304167 | 16361200 ~ 16364020 (-) | False | fam183a |
| TU67689 | other | downstream | 1607721 | 16059893 ~ 16060466 (-) | True | G45731 |
| XR_006251188.1 | other | upstream | 73872 | 17743715 ~ 17774107 (-) | False | opa1 |
| XR_006251187.1 | other | upstream | 73872 | 17743715 ~ 17774107 (-) | True | opa1 |
| TU68751 | other | upstream | 974463 | 18644306 ~ 18645134 (-) | True | G46420 |
| TU68756 | other | upstream | 1044331 | 18714174 ~ 18717488 (-) | True | G46423 |
| TU68851 | other | upstream | 1385303 | 19055146 ~ 19056131 (-) | True | G46478 |
