RNA id: XM_043241042.1


Basic Information

Item Value
RNA id XM_043241042.1
length 3361
RNA type mRNA
GC content 0.41
exon number 9
gene id hsd17b7
representative True

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16610280 ~ 16617199 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGTGCGAACTCCATACGTACACAGAAGCTGCTGGAAAACCACGTTACGAAGGGAAAGTACAGTATCACGGGTAGCGTAGTCGCATATTGTCTGAATGTAAAGACAGGATGAAGAAAGTAGTGTTGGTAACCGGTGCAAACAGTGGCATTGGCCTTGCCCTGTGTGAGCGTCTGCTGAGCCAGGATGCCAAGCTGCAGCTCTGTCTGGCCTGCAGGAACATGCAGAGGGCTGATGCTGCTCGACAGGCTCTTCTAGTGTCTCACCCTCGCGCTCAGGTTACTCTGCTGCACTTAGACGTAGGCAACATGGGCTCTGTGCTCAGGGCTGCCGAGGAGTTCAAGCAGAAGTACAACAGATTGGACTGTCTGTATCTAAATGCTGGTATCATGCCTAATCCCAGGGTAGATCACAAAGCCTTTTATAAAGGCCTGTTTTCTAGTAATATGGTTCGCATGTTTGCCACGGGGGAGGGACTTCTGACCCAGGAAGATAAGGTCACACCCAATGGTTTGCAGGAGGTCTTTGCCACTAATCTTTTTGGTCATTTCCTTCTGGTGAGAGAACTGGAGCCTTTATTGTGTCAAATGGACCACAATTCTCTAGTGATCTGGACATCCTCCAGTAATGCCCAGCGTTCTGCCTTTAGTCTAGACGACATGCAGCATCAGAAAGGCCGTGAGCCCTACAGCTCCTCGAAATATGCATCCGATCTACTTAGCTTAGCCCTAAACCGTCACTACAACAACCAGGGATTGTACTCATCAGTGATCTGTCCCGGTCTGGTCATGACTAACCTCACCTATGGCATTCTACCATCATTCTTCTGGACTCTCATCATGCCAATAATGTGGCTTATAAGGATTTTCACCAACACTTTTACCCTCTCGCCTTACAATGGAGCAGAGGCTCTGTTTTGGCTGTTCATGCAGAAACCTGAGTCACTGGACCCGATGGCCAAATACCACAGTTTGACCTCTGGGCTTGGAAACAATTACACCCAACCACACAAGatgGATATTGATGAAAACATGTCAGAGGCCCTCTATGTGAAGTTATTAGAGCTCGAGGATACAGTGAGGAAGAAACTGAGAGACGAGGATGTagatatcaaaacaaaaaactaaatgtggACACAAAACCTCATGCTTTCTATCACCTCATAACACATTTCCTTCTTAAAGTATTCTCTAAGGAATGGATTCACCTTgcgaatatttatttttcttgatgATCTATAGAAACAGCTTAtgaaatgataatgataatcaCGTTTAGATTGTATTTACCAAAAGTACTTTAATCCAAACTGTTGCTTTCCCTTGCAGTTGAATGTACAACTTTGGCTTTACTATCACCATGCTCTACTTAGAagtattgtgcatttatatttgttgcAGTGCATTCCAAGGTGAAtggtttttacatttctaattacTGTGAAGGGTCAACAGTTTCTGACTCTGATGAAAAGCGGACCACAATTCCTACGTGgatttttagctgtttttaatgtCCATTTTAATGTGCCCCCAAAGGGATCTCTTCCAAGATGTTCTGATTAATATGAAAAACTAATTGTGTGGTGTCACTGCTGAGGGATTCGGGCATCAGGCTGTGAAAAATGAAATCTGCTCTTTCcagtgaacaaaaatatatgtgtggaactgtatatgcacattttatgattaataattcagcttaaaatataaactatttgTAGTGTTTTAAGATTTCACTTAACTTTGACAATATTTTACAGATCTGAATCTTttccaacaaaacaaataataaatctaaaatgtaatttgtgtgaTATACTTGCCGTACAGATACATGTGCgactgagactttttttttttacaatcttttctctttttttgtattagctCTCAAAGCACAAAGCAAATGCAACAAAGTAATATGAAGTGCCTTTGAACAATTTATTCAACTACGTTGCGTTTAATTAGCCTATTGTACATATGAGAAAGTAATGATTGCAATGCTCTGGATGAGATTTGGCAATGTAGGGAGATTGCAGATATTGATGTTGCCATGGTGACGAAGATCATAAAGATGCACTTCCCTGTGTTAATAGAGAAACGTGCATACTGAATCCATCTTGACTTTGCATGTTTTGCAAATaagtttagatatatttttaacacaacTTGTCAGCCTTACCTTTGTCTTGCGCGCTGATGTCCTATGGTTACACGTCGAGATGTTTGGTATATAACTTCTAATGAAGCTGGAGCCTATTTGCGCTGTTTTCTTTAAACTAAACAATATTAATCCGTTATACAGGATGAAGCGGTGTAAGCGCGTGTCGGTTGATCTTGTATTTCGTGACTGGTTAGATGTCGTACAGCTGCTGTATGCACCGGCTGAACTGTCTCCACATCTTCAGGATCCGCAAAGATTTGTTGTAGAGGGACTGATAAACCGCTCGCGTCGCAGTCCGCTTCTTCGGCGAAGCCGCTGAGTTTAGGGTTGCAGAATGCCCAGACCATGCCACAAAAGTACACAAAAAACGCTGACATCACCAAAATCATGAGCGCATAAGACTCGATCATAGCCTCGGTCACCACGTTGGGCATCCTTGCGCGACGAAAAACCACTTCCACGAATACACAAAGCTCGAGTTGTGCTCAGTCGAGGGGTCGTTAGCTGAGTGTCCGTGAATCAGGGTTCTTCTGTCCTCCAGCGCTCGAGCCTCACGCCTGCTTCtgcctttattacagtttaaggAAAGTTTCGCACTTCGCTATATTTCTTTGTCAATAAAAAATACGTGTTTATGACGAGAGGAAATGAGATTGCACATTGATCTAAACGCTATGGGAGGGCACGTGGAGAAAGACGCTGTTTTAAACTAGTGTTTAATTCGACCCGTTATATTAGGCGTGCTGGTGTCAGAAAATATTAACAGTAGTTTCCACAAATCATTTGTAGTGGAAACTGGGATGATTGCACATTTTTGAAAGACAcaccccaccccaccccccTGCCACTCACTCACCAGGGATTAcgcaaaaatattctttactgttttttttttagctttctgtTTTTTCAGGAAAATCACATCAAAGTTCATCATAGAAGCCTGTTTGGTGTTTGATGTGTGTTCACACTTGTTTCACAATGTTTTACCTGAAGTGTGAACACACCCTCGCACAATGCCAAACCTGCCTGACTTCTGTGTAAAAGAGCAATTCTGAGAAATTTCTAAATCAGTGTTGACCAAAACAGGTTTATTATGATCCGAGTGTGAGAATTTTAGGTGATCATGGGTCAAATAATACAGTTGTATACATAAAATCCTTTTAAAGTAGTAAATAAAAGATGAACGCAATGAAAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K13373 HSD17B7; 17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU67746 lncRNA downstream 287475 16320413 ~ 16322805 (-) True G45770
TU67717 lncRNA downstream 339172 16270902 ~ 16271108 (-) True G45753
TU67716 lncRNA downstream 340888 16268915 ~ 16269392 (-) True G45752
TU67715 lncRNA downstream 342738 16267183 ~ 16267542 (-) True G45751
TU67666 lncRNA downstream 491694 16058245 ~ 16118586 (-) False G45709
TU67946 lncRNA upstream 570257 17187456 ~ 17187794 (-) True G45897
TU67960 lncRNA upstream 626481 17243680 ~ 17246369 (-) False LOC122347244
TU67974 lncRNA upstream 795839 17413038 ~ 17414139 (-) False brinp3a.2
TU67995 lncRNA upstream 897439 17514638 ~ 17518605 (-) True G45930
TU68086 lncRNA upstream 1190422 17807621 ~ 17808115 (-) True G45993
XM_043241680.1 mRNA downstream 617 16603295 ~ 16609663 (-) True serbp1a
XM_043241681.1 mRNA downstream 618 16603295 ~ 16609662 (-) False serbp1a
XM_043242455.1 mRNA downstream 32217 16571144 ~ 16578063 (-) True slc35d1a
XM_043242456.1 mRNA downstream 32224 16571144 ~ 16578056 (-) False slc35d1a
XM_043242977.1 mRNA downstream 39819 16563950 ~ 16570461 (-) True mier1a
XM_043242696.1 mRNA upstream 1373 16618572 ~ 16647615 (-) False ddr2a
XM_043242694.1 mRNA upstream 1373 16618572 ~ 16647615 (-) False ddr2a
XM_043242695.1 mRNA upstream 1373 16618572 ~ 16647615 (-) False ddr2a
XM_043242693.1 mRNA upstream 1373 16618572 ~ 16647615 (-) True ddr2a
XM_043242411.1 mRNA upstream 32266 16649465 ~ 16659733 (-) False uap1
TU67772 other downstream 246260 16361200 ~ 16364020 (-) False fam183a
TU67689 other downstream 549814 16059893 ~ 16060466 (-) True G45731
TU67688 other downstream 550513 16058968 ~ 16059767 (-) True G45730
TU67521 other downstream 1004810 15603910 ~ 15605470 (-) True G45606
TU67455 other downstream 1279463 15328967 ~ 15330817 (-) False LOC122347580
TU67937 other upstream 199441 16816640 ~ 16830208 (-) True rgs8
TU67944 other upstream 569490 17186689 ~ 17187318 (-) True G45895
TU67962 other upstream 690616 17307815 ~ 17308478 (-) True G45910
XR_006251188.1 other upstream 1126516 17743715 ~ 17774107 (-) False opa1
XR_006251187.1 other upstream 1126516 17743715 ~ 17774107 (-) True opa1

Expression Profile