Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043241336.1 |
| length | 966 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 8 |
| gene id | sft2d2a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056704.1 |
| NCBI id | CM032073.1 |
| chromosome length | 27473687 |
| location | 17792318 ~ 17794634 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68036 | lncRNA | upstream | 19585 | 17772154 ~ 17772733 (+) | True | G45962 |
| TU67983 | lncRNA | upstream | 123311 | 17553517 ~ 17669007 (+) | True | G45922 |
| TU67986 | lncRNA | upstream | 123311 | 17553517 ~ 17669007 (+) | False | G45922 |
| TU67952 | lncRNA | upstream | 552340 | 17237590 ~ 17239978 (+) | True | G45903 |
| TU67945 | lncRNA | upstream | 604514 | 17187418 ~ 17187804 (+) | True | G45896 |
| TU68127 | lncRNA | downstream | 150092 | 17944726 ~ 17995069 (+) | True | G46020 |
| TU68133 | lncRNA | downstream | 220606 | 18015240 ~ 18018835 (+) | True | G46024 |
| TU68115 | lncRNA | downstream | 233140 | 18027774 ~ 18046687 (+) | False | G46018 |
| TU68116 | lncRNA | downstream | 233140 | 18027774 ~ 18046687 (+) | True | G46018 |
| TU68124 | lncRNA | downstream | 233140 | 18027774 ~ 18046687 (+) | False | G46018 |
| XM_043241277.1 | mRNA | upstream | 472 | 17786499 ~ 17791846 (+) | True | tmem45a |
| XM_043241330.1 | mRNA | upstream | 6153 | 17779165 ~ 17786165 (+) | False | lnp1 |
| XM_043241328.1 | mRNA | upstream | 7098 | 17779162 ~ 17785220 (+) | True | lnp1 |
| XM_043241329.1 | mRNA | upstream | 7098 | 17779163 ~ 17785220 (+) | False | lnp1 |
| XM_043241540.1 | mRNA | upstream | 275089 | 17514420 ~ 17517229 (+) | True | LOC122346707 |
| XM_043241888.1 | mRNA | downstream | 362 | 17794996 ~ 17809179 (+) | True | chd1l |
| XM_043241890.1 | mRNA | downstream | 362 | 17794996 ~ 17809179 (+) | False | chd1l |
| XM_043241889.1 | mRNA | downstream | 362 | 17794996 ~ 17809179 (+) | False | chd1l |
| XM_043241891.1 | mRNA | downstream | 362 | 17794996 ~ 17807766 (+) | False | chd1l |
| XM_043241892.1 | mRNA | downstream | 14627 | 17809261 ~ 17818232 (+) | True | traf3ip2l |
| TU67943 | other | upstream | 605010 | 17186708 ~ 17187308 (+) | True | G45894 |
| TU67277 | other | upstream | 2225650 | 15564981 ~ 15566668 (+) | True | G45448 |
| TU67233 | other | upstream | 2332932 | 15358861 ~ 15459386 (+) | True | G45419 |
| TU67192 | other | upstream | 2554118 | 15236211 ~ 15238200 (+) | False | pomgnt1 |
| unassigned_transcript_1264 | other | upstream | 3711314 | 14080933 ~ 14081004 (+) | True | trnag-ucc_2 |
| TU68129 | other | downstream | 200557 | 17995191 ~ 17996717 (+) | True | G46022 |
| XR_006251243.1 | other | downstream | 362021 | 18156655 ~ 18164954 (+) | False | tubgcp5 |
| TU68431 | other | downstream | 782644 | 18577278 ~ 18588447 (+) | False | atp10a |
| unassigned_transcript_1265 | other | downstream | 1357468 | 19152102 ~ 19152173 (+) | True | trnaq-uug_14 |
| TU69007 | other | downstream | 1785855 | 19580489 ~ 19581824 (+) | False | itpr1a |
