Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043241354.1 |
| length | 1233 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 11 |
| gene id | agxta |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056704.1 |
| NCBI id | CM032073.1 |
| chromosome length | 27473687 |
| location | 12084281 ~ 12087593 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0030170 | pyridoxal phosphate binding | molecular_function |
| GO:0008483 | transaminase activity | molecular_function |
| id | description |
|---|---|
| K00830 | AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU65869 | lncRNA | downstream | 655518 | 11428125 ~ 11428763 (-) | True | G44501 |
| TU65799 | lncRNA | downstream | 841775 | 11242277 ~ 11242506 (-) | True | G44460 |
| TU65798 | lncRNA | downstream | 842249 | 11241637 ~ 11242032 (-) | True | G44459 |
| TU65796 | lncRNA | downstream | 844817 | 11239119 ~ 11239464 (-) | True | G44457 |
| TU65791 | lncRNA | downstream | 846083 | 11237962 ~ 11238198 (-) | True | G44452 |
| TU66210 | lncRNA | upstream | 62241 | 12149834 ~ 12437749 (-) | False | G44705 |
| TU66214 | lncRNA | upstream | 62241 | 12149834 ~ 12198838 (-) | False | G44705 |
| TU66215 | lncRNA | upstream | 62241 | 12149834 ~ 12437749 (-) | True | G44705 |
| TU66216 | lncRNA | upstream | 62241 | 12149834 ~ 12437749 (-) | False | G44705 |
| TU66217 | lncRNA | upstream | 62241 | 12149834 ~ 12217207 (-) | False | G44705 |
| XM_043241357.1 | mRNA | downstream | 741 | 12081977 ~ 12083540 (-) | True | dtymk |
| XM_043242753.1 | mRNA | downstream | 21863 | 12055892 ~ 12062418 (-) | False | stk25a |
| XM_043242757.1 | mRNA | downstream | 21863 | 12055892 ~ 12062418 (-) | False | stk25a |
| XM_043242754.1 | mRNA | downstream | 21863 | 12055892 ~ 12062418 (-) | False | stk25a |
| XM_043242756.1 | mRNA | downstream | 22207 | 12055892 ~ 12062074 (-) | False | stk25a |
| XM_043241350.1 | mRNA | upstream | 631 | 12088224 ~ 12094740 (-) | True | zgc:103559 |
| XM_043241195.1 | mRNA | upstream | 175326 | 12262919 ~ 12264713 (-) | True | LOC122346505 |
| XM_043243024.1 | mRNA | upstream | 543219 | 12630812 ~ 12699547 (-) | False | LOC122347614 |
| XM_043242303.1 | mRNA | upstream | 879507 | 12967100 ~ 12970628 (-) | False | im:7152348 |
| XM_043242304.1 | mRNA | upstream | 879507 | 12967100 ~ 12970628 (-) | True | im:7152348 |
| unassigned_transcript_1088 | other | downstream | 111501 | 11972709 ~ 11972780 (-) | True | trnap-ugg_4 |
| unassigned_transcript_1087 | other | downstream | 111730 | 11972480 ~ 11972551 (-) | True | trnag-ucc_1 |
| XR_006251151.1 | other | downstream | 1014823 | 11055035 ~ 11069458 (-) | False | brdt |
| XR_006251152.1 | other | downstream | 1014824 | 11055035 ~ 11069457 (-) | False | brdt |
| TU65678 | other | downstream | 1367540 | 10710045 ~ 10716741 (-) | True | G44358 |
| unassigned_transcript_1090 | other | upstream | 883490 | 12971083 ~ 12971154 (-) | True | trnap-ugg_5 |
| unassigned_transcript_1091 | other | upstream | 883885 | 12971478 ~ 12971549 (-) | True | trnap-cgg_1 |
| unassigned_transcript_1092 | other | upstream | 1333054 | 13420647 ~ 13420718 (-) | True | trnaa-cgc |
| unassigned_transcript_1093 | other | upstream | 1333236 | 13420829 ~ 13420900 (-) | True | trnaa-cgc_1 |
| unassigned_transcript_1094 | other | upstream | 1333727 | 13421320 ~ 13421391 (-) | True | trnaa-ugc_1 |
