RNA id: XM_043241414.1


Basic Information

Item Value
RNA id XM_043241414.1
length 8504
RNA type mRNA
GC content 0.45
exon number 48
gene id kif1aa
representative False

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 12097680 ~ 12152964 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GATGTCACTGGTTCAGTCAGTCTCAGCATCACTGCTCTAGGCAGCCAGCAGAGCCATTTTGGCTTCTACATTACAGGGCACTCAAAGATCTCTCCTCCAAGAAGCCTTCCTCCTCACAAGCAGGCCTCGCCGGGGCGTCCAGCTGCACCTCGCTGGAACGAATAAAGGATCCTCTGTTAAACAGAGGGAAAAGCGTTTTCCACATATCAGAGGAAGAGAATTTAAGAAGCCAGCGCAAGAGGCAGTGGCGGGAGCTGATCTGTGGAGTCAGTAGCTGAGAGCATCAGAGGATCACCATTGTAAAGGTGTAAGCAGTGACCTGAACTTTTAAAGGAGTGCTTTcagcacacgcacacagaggCACCATGGCCGGGGCCTCGGTGAAGGTGGCGGTGAGAGTCCGTCCCTTCAACTCTCGTGAGATGAGTAAAGAGTCCAAGTGCATCATCCAGATGTCAGGAAACACAACCACCATCATCAACCCCAAAGCccccaaagaaaacaaaagcttcAATTTTGATTACTCCTACTGGTCACATACCTCGCCAGAAGATATCAACTATGCCTCCCAGCAGCAGGTGTACAGAGACATCGGAGAAGAAATGTTACTTCATGCCTTTGAGGGCTACAACGTCTGTATTTTTGCATATGGCCAGACTGGGGCCGGTAAATCTTATACCATGATGGGCAAACAGGAAAAAGACCAGCAGGGGATTATTCCATTGCTGTGTGAAGACCTTTTTACCAAGATTAATGACAACAATACTGATAACAACATGTCCTATTCTGTGGaggttAGTTATATGGAGATTTACTGTGAAAGGGTACGAGATCTTCTAAACCcaaaaaacaaaggaaatctGCGTGTGCGAGAGCACCCGTTACTGGGACCGTACGTAGAGGATCTGTCCAAACTCGCCGTCACATCATATAATGACATCCAAGACCTGATGGACTCAGGGAATAAGGCTAgGACAGTAGCTGCCACTAACATGAATGAGACCAGCAGCCGTTCACACGCTGTCTTCAACATCATCTTCACCCAGAAGCGTTTTGACTCAGAAACAGACAACACTTCAGAAAAGGTCAGCAAAATCAGTCTGGTGGATTTAGCCGGCAGTGAAAGAGCAGATTCCACTGGAGCCAAAGGCACACGGCTCAAGGAAGGGGCAAACATCAATAAATCACTCACCACCCTGGGAAAAGTCATTTCAGCTCTGGCTGAGGTGGATTCTGGCTCAAACAAGaacaaaaagaagaagaaagtggaGAGTTTTATTCCTTACAGGGATTCTGTACTGACCTGGCTACTGAGGGAGAACCTGGGTGGCAACTCTCGCACTGCAATGGTGGCGGCTCTCAGTCCTGCTGACATCAACTATGATGAAACCCTCAGCACCCTCAGGTATGCAGACAGGGCTAAGCAGATCCGTTGTAATGCTGTGATCAATGAAGATCCTAATAACCGTCTGGTGCGTGAGCTGAAAGAAGAAGTGTCTCGTCTGAAGGACCTCCTTTATGCCCAGGGCCTGGGCGACATTATCGAGATGACCAATGCTATGACGGGGATGAGTCCCTCTCCAACTCTCTCCGCCCTGTCCAGCCGGGCTGGTTCCATCAGCAGCCTCCACGATCGCATCATGTTCAGCCCAGGGAGCGAGGAAGCCATCGAGAGACTCAAGGAAACAGAGAAAATTATTGCAGAGCTCAATGAAACCTGGGAAGAGAAGCTTCGCCGTACAGAAGCCATCAGAATGGACAGAGAAGCACTTCTGGCCGAGATGGGTGTGGCCATGCGTGAGGACGGAGGAACTGTTGGAGTCTTTTCACCAAAGAAGACACCCCACCTGGTGAATCTGAATGAAGATCCTTTGATGTCTGAATGTCTCCTTTATTACATCAAAGATGGAATTACCAGGGTGGGGAGGGAGGATGCCAGCAGAAGACAGGACATTGTTTTGAGTGGTCATTTCATCAAAGAGGAACACTGCACTTTCACCAGCACAACTGGACCTACGGGAGAAGctgtcATTCTTGAGCCGTGTGAGGGAGCAGAAACTTATGTCAATGGAAAGAGAGTAACAGAAGCCACTGTTCTCAGATCAGGGAACCGAATCATTTTGGGCAAGAGCCATGTGTTCCGCTTCAATCATCCAGAGCAGGCTCGTCAGGAACGTGAACGAACCCCCTGCGCTGAGACACCAATGGAGCCTGTAGACTGGGCCTTTGCTCAGAGAGAACTCCTGGAGAAACAGGGCATTGATATGAAACAGGAAATGGATCAGAGACTGCAGGAACTTGAGGATCAGTATCgcaaagagagagaagaggccAACAATCTACTGGAGCAACAGAGATTAGACTATGAGAGCAGGTTAGAAGCCCTGCAGAAGCAGGTAGATCGTTACTACCCAGATGCAGTAGAGGAAGATGAAGAGCCTGAGGAGGAAGTGCAATGGACCGAGAGGGAGACAGAACTGGCGATGTGGGCTTTCCGTAAATGGAGGTGTTATCAGTTCACATCTCTCAGAGATCTGCTTTGGGGCAATGCCATCTTCCTCAAGGAGGCCAATGCTATTAGCGTGGAGCTGAAGAAGAAGGTTCAGTTCCAGTTCGTGTTATTGACAGACACGCTTTACTCTCCGCTTCCGCCGGACCTGTTACCACCAGAGACAGCTAAAGACCGTGAGAAAAGCCCATTCCCTCGCACCATTGTGGCTGTAGAAGTCCAAGATCAGAAAAACGGAGCCACACATTACTGGACCCTGGAGAAGCTCAGGCAGAGGCTGGACCTGATGAGAGAGATGTATGATCGTGCCGCTGAGGTGCCTGGGAATGCTCTTGAAGACTGTGACAGTGTACTGACCGGTGGTGATCCGTTCTACGACCGCTTTCCCTGGTTCCGTCTGGTCGGAAGGGCATTCGTGTATTTGAGTAATCTGCTTTATCCCGTGCCTTTGGTCCATCGGGTTGCCATCATCAATGAAAAGGGAGAGGTCAAAGGTTTCCTCAGAGTAGCTGTCCAGGCAATATCAGCCGATGAAGAGGCACCAGACTATGGCTCTGGTGTCCGACAGTCAGGCACTGCCAAGATTTCTTTTGAAGACCAGCAGTTTGAGAAgTTCCAGTCAGAGTCCTGTCCTTCTGGTCTTTCacgtgctgctgtctctcaggaaGAGCTGCGAATTGTTGAGGGTGAGGGCCAAAATGCAGAGATGGGACTGTCAGCGGATGAGGTTAACAATAATACCTGTTCAGCTAACCCAGAGGAGCTGGACAGCCCTGTCAAAACCGGTCTTGATGGCATACTGGATGGCGCTCTGGATCACTTGAGGATTGGCGAAGTCTTTACATTCAGAGTTACTGTGCTGCAGGCATCAAGCATATCCGCTGAATATGCAGACATATTCTGCCAGTTCAATTTTATTCACAGGCACGACGAAGCGTTTTCCACAGAGCCGTTGAAGAACACTGGAAGAGGTCCACCCCTTGGCTTCTACCATGTGCAAAATATTGCTGTGGAAGTGACTAAGTCTTTTATAGAGTATATAAAGACTCAGCCAATCGTGTTTGAAGTGTTTGGACATTACCAGAAGCAGCCTTTCCCTCCGCTCTGCAAAGATCTCATTAGcccATTGCGCCCATGCAGACGACAGTTCCCAAGAGTCATGCCTCTTTCCAAACCAGTACCTGCCACTAAACTGACAGCTCTCACACGACCCACGGCAGGACCGTGCCATTGTAAATACGACCTGATGGTCTTCTTCGAAATCTGTGAGCTAGAGGCCAATGGAGACTATATCCCAGCTGTAGTGGACCACCGGGTAGGCATGCCCTGCCATGGCACATTCATGCTACATCAGGGCATCCAAAGGAGAGTCACGGTCACCATAGTGCACGAGTCAGGACAAGATATTAAGTGGAAGGAAGTGCGAGAGCTGGTTGTAGGGCGCATCCGGAACACGCCTGAAGCAGATGAGACAATCATCGACCCCAATATTCTCTCTCTCAACATACTGTCTGCAGGATATATCCATCCCGCACAAGATGACAGCATTTCCTTGGGGATTGATCCTAGGACATTCTACCATTTTGAGGCTGCTTGGGATTCATCCATGCACAACTCTTTGCTGCTTAACCGTGTCACTCCTTACGGAGAGAAAATCTATATGACTCTGTCTGCTTACCTGGAGATGGAGAACTGCACACAGCCCACAGTGATAACCAAAGACTTATGCATGGTGTTCTACTCAAGAGACGCCAAGCTCCCAGCATCTCGCTCCATCAGGAACCTCTTCAGCAGTGGCACCTTGAGGCCATCTGAAGGAAATCGTGTAACTGGTGTGTATGAGCTCAGTCTGTGCCACCTGGCTGATGCAGGGAGCCCAGGAATGCAAAGACGGCGCAGGAGGGTGCTGGATACGTCGGTGGCATATGTGCGAGGGGAGGAGAACCTGGCTGGCTGGAGGCCCCGCAGTGACAGCCTCATCCTGGACCATCAGTGGGAGCTGGAGAAACTGAGCCTCCTGCAGGAGGTGGAGAAAACCAGACACTACCTCCTCCTTAGGGAGAAGCTGGAGTCCACCCTGCTGCTGGGCCAGGAGTCGCTGCTGTCCTGCGGGAGTGAGGATCTAACCGAGTCCTCTTCCCCATCCACCCACCTGGGCCTGGGCCACAACCCTTGCCCCGGCCCTGACACACCCAATGAGAGGCAGATGGAGCTGGCTGCAAAGTGTCTTCGTTTGCTTAACCACACCTTTAACAGGGACTACAGCCATGTGTGTGTTAGCGCCAGTGAGAGCAAGTTGAGCCAGATGTCAGTAACTCTTTTGAAAGACTCTGCCTCGGTGTGTGCTGAAAACACCCTTACCCCGTCCTCCACATGCCCGTCATTGGTGGAGGGACGCTACAGCCACAACGCTGAACTTAGACCCCCAACACCTCGATCTCGTGCTGTCAGCCCCATCCCTGACTCTGAAACTGAGGGCAAGAAGTCTCCTCAAGAGTTTAAATCAAGAACCCGCACTTTTGTGCCAGACATTCAGGAAATCCGTGTCAGCCCAATTGTGTCAAAGAAAGGTTATTTGCACTTCCTGGAGCCCCAAAGTAATGGCTGGGTTAAGAGATATGTGGTGGTACGCCGGCCTTATGTCTACATCTACAACACTGAGAGAGACACAGTGGAACGGGCCATTCTTAACCTGTCCTCAGCACAAGTGGAGTACAGCGAAGACCAGCAGGCCATGCTAAAGACCCCCTACACATTTGCGGTATGCACAGAGCATCGTGGGATACTCCTTCAAGCCAGTAATGACAAGGAGATGCATGACTGGCTGTATGCCTTTAACCCTCTGCTTGCTGGATCTATCAGGTCTAAACTGTCCAGAAGAAGAGCCGGGCAGATGAGGTTTTGAGCCCACTACATGTATACCTTCTGTACAACTCCTCGAGGACAAAACCCCCCACAAAGGACTAATCTTGTAAATAGATCTACTGACAGATCCCCCAGTTTCTGTGCTTAATCAACTCTCTGAGCCTCTGTTTCCTACATGTGTGTACCTGCACCTGCCCACACTAGCACCAACTGTGCACCTTGTATCTTAAAGGCCCCCCTTTGTTGTGCATCTACAGTGGCCTAAATATTCAACTTATAGCGCCAAGAGAACTACTTTATCGGGGTAGAGATAGTATGCTTATGTAGTCTTCAGCAACATCTTTAGCAAGCTGGTGATGGGAATTTCTAATTCTGAAGCTGTCAGCTCATGCAAACACATCTGAATTTGTTACTGTGAAGAATGACGTCCATATCTTGGGTTTGTGGGAAAATGGATCACATGGCCTTACTGTGTTACTCTATGGGTTTAAAACGATAAAACTGGTCAGTATTTAAATCAGCAGACCATATGTTTATTCATCTCTTGGCTACGGAAGATAGAATTGATCAATGATACGCAGTTCTTAGCAAGGAGCAGATGAATCACATCATATTACGCTCTTACTCTCTTTAAGTGCAGTTCTTGGACACAGTTCAACCCATCATAAATACTCATATACCTTTATAATGTTTCCCTTGTACGGCTTTGAAATGCATAAAGTTTTCAAAATAACCAGGACGCATTAGGGACAATTTGGCAAATGGTTGCATTCTCATGTCTCTGTATGAGAACCATTATAAAGATTGGCCTATTTTTGTTGGAGTACTGGTCAGTAGATTTATCTGAAATGTATCATAATCCAgtctaatattttatataaaaaattatcgGTATCCCCAAATGATCTTATATCtgtctaatttatttttaaaatttctattaAAGTCTTATCTTGTtaggtatttatttaacatgtttttatttatttcaccatGTATTTATTGACAAAGactgtaatatttttgaagaaGTACAGTGCAATTTCTGCATATGGCACTTTTTTTATCATGAGTTGACTAACCTCCCTTTTACTGACCACACTGCTCTCATTCCCCCCCCCGACAAAGTGAAACGCATTAGGGGAAACAGCTTAGAAGTGAATAGCTGGGATAGCTGCTATTACATGTAGATTACttgaattttactttttagGTACGTTAAACCAGTTTTGGTTGAGAAAAACGAAAATGCTTTTTGCGAGATTTATCAGGTTAAGAAAAATCATCCTCCTTGCCCAAACTCCCAAATGAGTGTTTGTACAGTGGTCAGTCTTGGAAAATGAAGTTTGTTAGAGCAAATCAAATGTATAGTACTGATGGAATTTTCTACACGCATCCTAGAGAGTGATGACATATGATTTTGTGCCTCTTTGCATCCTCTGTTTAATTTGATCATTTCCATGATCTTAATCCCTGTGCGCTTCTTTAACAGGGTGAATGTCCACTTTAAGGCCCACTCATCGCTGTCACTCTTTCTATTCGTGTGGTGTAATCATTCCTGTGCACAGgcaaaagcagttttaaatgtgcttttagtttgcatattttgtttgtatattgcACTTGTCCTAAATTTAACTAGGTTTATAAGCATAtctaaatagtatttttttttttacttaaaaatttcacttaaaaatgaaccGAACAAATCTATTCATTCAGTCGTCATGGACTCTAGATATAAACCCTGCTGGTGTTATTCTTCCAAtcctttttttatgattatgatttcaTAAAATATCTGACAGGCTAACACATacaacataatacattttaaattccaTTTTCTAGATTGAAGTCATCTCAGGTATGATTGTTCTGCTTAATGTCAATAGGCTTAGGCTGTGCAAACCCCATCAAACAGGCGACCGTCTGTGTTGAGATTGCAGATAGCTGTTTAACTTCAGCCAAATGACTGGTTTTGGAAtatgaaactgcatttttgagTTATATAATACCAACAGCTGTGATTTAGACCCTTTGTAGTGCAAAAGATGTTCTGTGGATCAGACCTCGACTTGGTCACAGCAGCAGAGCCCATATGTCCACTATCATTAGTCCAGAAGGCTTATAGTAATGTGGTTTTGGGATGATCCTGCAGGTTACCTGAGATGACCTTTTCTTCCATACCTGCAAATTTTAAAGTGCAGATCAACTATTTGCAAACCTGAGGTTCCTCCAGGGCATGATTCAGACATATCTGCATGACTGAGGCCAGCCAACCTTTAGCACATGCTGATTATAGCAAGAATCTGGCACTGAACGAACCGATATTGAAAGCCTCGATCTGTATATGAATAAACATCAAAAATCTACATTTCTGTTTCCAAAATGTGGGTTTCTGTTTCTATGATTAAGTGGAGTTCTGCTTGTTTGTAAAAGCAGAACGCAAAGGATTCTCAATACCTGAAGGTTCTCGGTTACTGCACTTTTTTGTGATTACTGTGTGTATATCTCACTTTCATGACCAGTTCAGAGTAATATAAGCAATGCCAcaacttttagaaaaaaagagtgtgttaatagtaataataggtgcatttataaaataagcGAGAACAAAATTAACAGAGTTAAAAGAATTACTTTCATTTTGAGTATGCAAGCAAATGTGTATCgtattgactttttttgtctgtgCACCTTGTAGAAAGTAATGCAGAGAGCTGAATGATATTCTTCATATTATAGCCTGTCCTGTACCATTTCTACAAGCAATTTACATGAAACATGTTTCAAGGCTCAAaacattgcattcattttaccATCTCccaaaatgaaagaatgaatcaGTTCTCATAATCAACACCAAATATTTGTGTGCTTCCATTCTCCTCTTATGCACTCcactcatatttttttttctgttgttttctttgttttacttGCCTTGTATATAAACATGATTGCTGTGAATGGTGTAATATGCAGTTGTAACTGGTTTGTACCATCTTCAATGGGCAGTAGTTTAATGTCTCTCTCTGAGTGTTGGAATTATGAGTCAAATGTTTGTGTACACTTAACACATTGTcagatatgaaataaatgtggaACTTATGCAACACAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU65995 lncRNA upstream 5229 12087399 ~ 12092455 (+) True G44588
TU65972 lncRNA upstream 103547 11993558 ~ 11994137 (+) True G44575
TU65963 lncRNA upstream 120273 11976827 ~ 11977411 (+) False G44574
TU65966 lncRNA upstream 120734 11937101 ~ 11976950 (+) True G44574
TU65960 lncRNA upstream 120734 11971581 ~ 11976950 (+) False G44574
TU66023 lncRNA downstream 1358 12154322 ~ 12155432 (+) False scly
TU66030 lncRNA downstream 5098 12158062 ~ 12159895 (+) False scly
TU66049 lncRNA downstream 324160 12477124 ~ 12482182 (+) True G44604
TU66050 lncRNA downstream 324160 12477124 ~ 12482182 (+) False G44604
TU66052 lncRNA downstream 339989 12492953 ~ 12493642 (+) True G44606
XM_043241353.1 mRNA upstream 15656 12075450 ~ 12082028 (+) False atg4b
XM_043241352.1 mRNA upstream 15656 12075579 ~ 12082028 (+) False atg4b
XM_043241351.1 mRNA upstream 15656 12075581 ~ 12082028 (+) True atg4b
XM_043241355.1 mRNA upstream 23120 12065298 ~ 12074564 (+) True boka
XM_043241859.1 mRNA upstream 45897 12011095 ~ 12051787 (+) False farp2
XM_043241013.1 mRNA downstream 1304 12154268 ~ 12159899 (+) True scly
XM_043241073.1 mRNA downstream 286136 12439100 ~ 12444241 (+) True LOC122346457
XM_043241038.1 mRNA downstream 311578 12464542 ~ 12469417 (+) True LOC122346426
XM_043242840.1 mRNA downstream 372076 12525040 ~ 12526957 (+) False LOC122347491
XM_043242035.1 mRNA downstream 551681 12704645 ~ 12731083 (+) True LOC122347050
TU65993 other upstream 5229 12087399 ~ 12092455 (+) False G44588
XR_006251144.1 other upstream 87575 12002148 ~ 12010109 (+) False LOC122346564
unassigned_transcript_1089 other upstream 124640 11972971 ~ 11973044 (+) True trnai-aau_2
TU65822 other upstream 677354 11415273 ~ 11420330 (+) True G44478
TU66085 other downstream 613219 12766183 ~ 12780920 (+) False crocc2
TU66063 other downstream 927646 13080610 ~ 13082119 (+) False smx5
TU66125 other downstream 955771 13108735 ~ 13109366 (+) True G44645
TU66465 other downstream 1241265 13394229 ~ 13409912 (+) True G44887
XR_006251224.1 other downstream 1819209 13972173 ~ 13979005 (+) False meltf

Expression Profile