RNA id: XM_043241897.1


Basic Information

Item Value
RNA id XM_043241897.1
length 1397
RNA type mRNA
GC content 0.43
exon number 10
gene id sept9b
representative False

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10296004 ~ 10335041 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

agCAACCTTGTCCCCTCCCACTTTCACATTGACTTATATGTCACTTGCTTTCTGTCACACATTTTTCAAGCTACGGAATCATCAAATTCAACGACTTTGCGGACTTAATACCCTCTTTTGGGGCCAGAGGTCATTACAAGTTTTTACGGCAGTATGGCAGATGTAGGAAAGACCCCCGTGACACGCAATGAGAAGACTAACAGTGACTTTGGCTATGTGGGCATTGATGCCATCTTGGAACAGATGAGAAGGAAAGCCATGAAACAAGGCTTCGAGTTTAACATCATGGTAGTGGgtCAGAGTGGTCTGGGAAAATCCACGTTGATGAACACACTTTTTAAATCTAAAGTTAGTCGCAGATCTTTGATGACAACAGAGGAAGAGCGAATTCCCAAGACAATTGAGATCAAGTCCATCAGTCATGATATTGAGGAGAAAGGAGTGAGAATGAAGCTAACTGTCATTGACACTCCAGGTTTCGGAGACCAGATAAACAATGAGAACTGCTGGCAGCCCATCATGAAGTTCATTAATGCACAGTATGAGCAGTATTTACAGGAAGAGATCAACATCGAAAGGAAGAAGAGGATTCCAGACTCACGAATCCACtgctgcatatattttattcctCCTACTGGACACTGTTTGCGGCCAATTGACATTGAATTTATGAGACACCTGAGTAAAGTGGTAAACATCGTTCCTGTTATCGCCAAGGCAGACACACTCACCCTGGAGGAGAGGGACTTCTTCAAAAAGAAGaTAAGAGAGGACTTGCGAGCCAATGAAATCGACATCTATCCTCAAAAGGAGTTTGATGAGGATGCAGAGGACAGAATTATTAATGAGAAGATCAGGGAGATGATCCCATTTGCTGTGGTGGGAAGCGATCAAGAATATCAGGTCAATGGAAAAAGACTTCTGGGCAGGAAAACAAGATGGGGGACAGTAGAAGttgaGAACACTGCACACTGTGAGTTTGCCTACTTGAGGGACCTGCTCATCAGAACTCATATGCAGAACATCAAAGATATCACAAGCAGCATCCATTACGAAATGTACCGTGTACGCAGACTCAATGAGAATAACACACAGGCAAACGGGCAGCCAGCAATCCACTCCAACGGCGTACCTGAGCACGAGGTCCTCTCTCATGAAATGTAAAGTCCTGACCATGCACCCGTCCATCATTCAGTCCGTccagctttttttccccttcaaatCCTCACTTTTCAATAATATCTTCCTCCGTTCATTCTGACTGGCTGCGTCTGctgactgttgttttttttaacaccaaaaaaatataacagaTCTGCGGAAAATGAATCTTTGAGCGTGTAGAAAAAATGTGATGTTCTGTCTGTAATGAGAGTTTTATTAAAGATGTGTtacta

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0031105 septin complex cellular_component
GO:0005525 GTP binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU65408 lncRNA downstream 52603 10242704 ~ 10243401 (-) False tnrc6c2
TU65413 lncRNA downstream 53495 10242210 ~ 10242509 (-) True G44168
TU65412 lncRNA downstream 57386 10238419 ~ 10238618 (-) True G44167
TU65386 lncRNA downstream 150857 10138905 ~ 10145147 (-) True cd7al
TU65311 lncRNA downstream 197825 10097980 ~ 10098179 (-) True G44105
TU65477 lncRNA upstream 48333 10356014 ~ 10356314 (-) False LOC122347367
TU65479 lncRNA upstream 64959 10372640 ~ 10372852 (-) True G44208
TU65480 lncRNA upstream 65489 10373170 ~ 10373568 (-) True G44209
TU65481 lncRNA upstream 68459 10376140 ~ 10376578 (-) True G44210
TU65484 lncRNA upstream 80363 10388044 ~ 10388442 (-) True G44213
XM_043241385.1 mRNA downstream 52579 10204617 ~ 10243425 (-) False tnrc6c2
XM_043241384.1 mRNA downstream 52579 10204617 ~ 10243425 (-) False tnrc6c2
XM_043241383.1 mRNA downstream 52579 10204617 ~ 10243425 (-) True tnrc6c2
XM_043242582.1 mRNA downstream 93254 10167236 ~ 10202750 (-) False rhbdl3
XM_043242568.1 mRNA upstream 48196 10355877 ~ 10358850 (-) True LOC122347367
XM_043242153.1 mRNA upstream 69650 10377331 ~ 10384083 (-) True zgc:174863
XM_043241196.1 mRNA upstream 82366 10390047 ~ 10394216 (-) True jpt1a
XM_043242047.1 mRNA upstream 87492 10395173 ~ 10398631 (-) True sumo2a
XM_043242050.1 mRNA upstream 91664 10399345 ~ 10406457 (-) False gga3a
TU65385 other downstream 150857 10141611 ~ 10145147 (-) False cd7al
TU65247 other downstream 268369 10025578 ~ 10027635 (-) False c6h17orf67
TU65030 other downstream 1023699 9271418 ~ 9272305 (-) True G43900
TU65029 other downstream 1025082 9269188 ~ 9270922 (-) True G43899
TU65026 other downstream 1028680 9266002 ~ 9267324 (-) True G43896
TU65678 other upstream 402364 10710045 ~ 10716741 (-) True G44358
XR_006251151.1 other upstream 747354 11055035 ~ 11069458 (-) False brdt
XR_006251152.1 other upstream 747354 11055035 ~ 11069457 (-) False brdt
unassigned_transcript_1087 other upstream 1664799 11972480 ~ 11972551 (-) True trnag-ucc_1
unassigned_transcript_1088 other upstream 1665028 11972709 ~ 11972780 (-) True trnap-ugg_4

Expression Profile