RNA id: XM_043242528.1



Basic Information


Item Value
RNA id XM_043242528.1
length 987
RNA type mRNA
GC content 0.46
exon number 4
gene id si:dkey-45d16.4
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 8547278 ~ 8549239 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


acacacacacagacgggaAAACATGGAACGCGGTTTCTCTCTCGCTGGACCTTCTTCTAATCCTCGTAAACGCCAAGTACGATTTTCAGCACGTCATGACATCCTGCTCCTCCGTGAGGTGATAGCACAGAACCCATTCACTTCTAAAGAGTCAGGCCGAATCTGGGCGAGGGTGGGTGAAATTATAACTGCGACTCTACAGGATGAGAACTTTGAGGTGGACGGACGCAGATGCAGGGAGAGAACCATGCTACTGTTggattattataaaaaacagGACTTTGCAAGTCTACGCAGGTTTGGTACAGAACGCCTGTATGCACAGAAAGAAGACCTGTTGCATGAAGTTCTGGAGCTGGAGGCAGAGAAGAATCTTCTGGCAAGTGGGGAAAGTAAATACCAAGATGACGAACTCAGGAAGAGAGCACTGGAGGAATTATCATCCCCTGAGCCTGACAAATCCACAGTGCTCTCAGTAACAGCAGCTCCCCCCACTGtgGTAGCCAGCCCAGAACctgaggagcaggaggaggcTGAGCTCACAGCGCCCACAGCCAAAAGGCCATGCCAGTGCTGCTGCCAGACCTACTCAGAGATCTTAAGCTTCTTAGAAAAGCGATTTGAAGCAGAGCAGAGTCTGCGAGAGGAGGAAATGGCACTTAGAAGAGAGGAGCTAGAAATCCAGAGGAATAAGATTGCCCTGGATCGGGAGCGTCTCGGAGCAGAAAGAAAAGAGCGGGAACGTCGGTTTGAGCTAGAGAGTCAGGAAAGACAGGTTATATTGGATTTGTTAAAAGAGAAGGTCCTAAAAAACGAACGAAACTCTGACTGAAATGAgttgaaatttttacttttagtctTTGATGTTGAAGTGTCATTCCAGTCAATGCTGTATTCTGTTTTCTCAGTTTGAATTGGTTTTATAGCATGAAAATAACATAATCCGATGATATTATAGCtcattgttgaataaaatggCCAAATGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU64815 lncRNA downstream 715 8546353 ~ 8546563 (-) True G43739
TU64808 lncRNA downstream 50645 8495764 ~ 8496633 (-) True G43734
TU64790 lncRNA downstream 80632 8460906 ~ 8466646 (-) True G43719
TU64779 lncRNA downstream 92415 8454131 ~ 8454863 (-) True G43710
TU64781 lncRNA downstream 94959 8450787 ~ 8452319 (-) True G43712
TU64892 lncRNA upstream 50557 8599796 ~ 8794740 (-) True G43791
TU64904 lncRNA upstream 157547 8706786 ~ 8707974 (-) True G43800
TU64978 lncRNA upstream 473280 9022519 ~ 9022881 (-) True G43855
TU64979 lncRNA upstream 475969 9025208 ~ 9025429 (-) True G43856
TU65011 lncRNA upstream 701460 9250699 ~ 9251679 (-) True G43881
XM_043241334.1 mRNA downstream 22285 8506768 ~ 8524993 (-) True LOC122346602
XM_043241959.1 mRNA downstream 46010 8496635 ~ 8501268 (-) True nprl2
XM_043241652.1 mRNA downstream 67442 8466738 ~ 8479836 (-) True gga1
XM_043241829.1 mRNA downstream 107893 8431444 ~ 8439385 (-) True cfap100
XM_043241920.1 mRNA downstream 129508 8381140 ~ 8417770 (-) True plxnb1b
XM_043242890.1 mRNA upstream 308295 8857534 ~ 8883164 (-) True ube2o
XM_043242055.1 mRNA upstream 337269 8886508 ~ 8932433 (-) False LOC122347059
XM_043242054.1 mRNA upstream 337269 8886508 ~ 8932433 (-) True LOC122347059
XM_043242056.1 mRNA upstream 337269 8886508 ~ 8925700 (-) False LOC122347059
XM_043241777.1 mRNA upstream 383844 8933083 ~ 8951173 (-) True acox1
TU64510 other downstream 499270 8047102 ~ 8048008 (-) True G43514
TU64423 other downstream 960911 7579895 ~ 7586367 (-) True G43463
TU64425 other downstream 960911 7579895 ~ 7586367 (-) False G43463
TU64424 other downstream 964158 7579895 ~ 7583120 (-) False G43463
TU64411 other downstream 1259351 7287290 ~ 7287927 (-) False LOC122346787
TU64907 other upstream 159467 8708706 ~ 8711960 (-) True G43801
TU64905 other upstream 162782 8712021 ~ 8713858 (-) False G43801
TU65020 other upstream 711377 9260616 ~ 9261245 (-) True G43890
TU65026 other upstream 716763 9266002 ~ 9267324 (-) True G43896
TU65029 other upstream 719949 9269188 ~ 9270922 (-) True G43899

Expression Profile