RNA id: XM_043242771.1


Basic Information

Item Value
RNA id XM_043242771.1
length 4209
RNA type mRNA
GC content 0.46
exon number 18
gene id evi5b
representative False

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13496135 ~ 13535440 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGAGCGTCATTAACGTCAGCACAGCCAAGCAAAACCAGAAAAGTTAGTTACCGTGCGACGTCTTCTGCCATCAGTGTACCAAAACGGTCTATGTATTCACTAACTTTCAAGAGAAACCTACATTTTGCAGATGACCTAGCCATCTAATGGTGGCGACAGACAAGGTAGCAGGCAAGCTGAGTTCGACTCTTTCATGGGTGAAGAACTCAGTGTCGCTCACGGTGAGTCAGATGGCTAGTCAGGTGGCCACCCCCTCGTCGCTGCACACCACTGTGGCTTCATCCACGGCCTCGCTGTCCTCGCCCTCCTCAGCCTCCCCGACCCAGCTCAGCCCGGATGATGTGGAGCTGCTGGCCAAACTAGAGGAGCAGAACAGGTTATTGGAGACGGACAGTAAGTCTTTACGGTCTGTGAATGGCTCGAGAAGGAACAGTGGCTCCTCACTGGTATCTAGTTCATCAGCCTCCTCCAACTTGTCACACTTGGAGGAGGATTCATGGATCCTGTGGGGACGCATCGTCAATGAGTGGGAAGATGTGCGgaagaagaaggaaaaacaaCTAAAGgaCCTGGTTAGGAAAGGCATTCCTCATCACTTCCGAGCAATAGTGTGGCAGCTGTTGTGCAACGCCCAGAATCTAGCCATAAAGGAGCAGTATTCTGAGCTGCTAAAGATGACCTCGCCTTGTGAAAAACTTATCCGCAGAGACATTGCCCGTACCTACCCCGAGCACGAGTTCTTTAAGGAGAAGGACAGTCTGGGTCAGGAGGTGCTCTTTAATGTTATGAAGgCTTATTCTCTGGTTGATAGAGAGGTGGGCTACTGTCAGGGAAGTGCTTTCATTGTCGGCCTTCTTCTGATGCAGATGCCAGAAGAAGAGGccttctgtgtgtttgtgaaactAATGCAGGATTACAGGCTGAGAGAGCTCTTTAAACCTAGTATGGCCGAACTTGGTCTTTGCATGTACCAGTTTGAATGTATGATTCAGGAGCAGCTCCCAGAGCTCCATGTGCACTTCCAGGCCCAGAGTTTTCATACCTCCATGTATGCTTCATCTTGGTTCCTCACCATATTTCTTACGtcttttcctcttcctgtcgCCACCAGGATCTTTGATATATTCATGTGTGAGGGTTTAGAGATAGTGTTTCGTGTGGGGATGGCCATCCTGCAGATGAATCAGGCTGAGCTCATGCAGTTGGACATGGAGGGAATGTTGCAGCACTTTCAGAAGGTCATCCCTCACCAGCTGGATAGTGGACCAGACAAAGTCATCCAGGCTGCTTATCAAGTCAAGTATAATgccaagaaaatgaaaaaATTGGAAAAGGAGTACACTACAATCAAAACCAAGGAGATGGAGGAGCAAGTAGAGATCAAGAGACTGCGCACAGAGAACAGACTCCTGAAGCAGAGAATAGACACTCTGGAGAAAAAGGGGAACCCACGCTGCTCCGAGGAGTTCATCCTGCAGTTGGAGAGGGAACTGGTGCAGGCCCGTCTTAAAGAGGCAGAGTCTCAGTGCGCACTGAAGGAGATGCAGGACAAGATTCTGGACATGGAGAAGAGAAATTCATCCCTGCCAGATGAAAACAACGTGGTGCGTCTTCAGGAGGAGCTAATTGGTGTAAAGCTGAGGGAGGCAGAGGCTTTAACAGGCCTTAAAGAGCTTAGACAGCAGGTCAGGGACTTGGAGGAGCACTGGCAGAGGCATCTGGCGCGCACGGCAGGCCGGTGGAAAGACAGTCCGCGGAAGAATGCAGCGAGCGAGCTTCAGGATGAGCTGATGAGCGTGAGGCTCAGAGAGGCAGAGGCACAGGCTGAGCTCAGAGAAATCAGACAGAGGATGCTGGAACTGGAGACCCAGAATCAGATACATAATAATCAACTGCGGCGTGCAGAACTAGAGGCACGAAATCTACAAGAGCGACTGCAGGTTTTGACCAACCAGAACAAGACGCTGCATACAGAGCTGCAGGAGACTAAACGGAAACAGGCTGAAATAGAGTGCAAGaaTAAAGAAGAGGTAATGGCAGTGAGGTTGCGAGAAGCTGACAATATTGCTGCCATGGCTGAGCTTCAGCAGCAGATCTCTGAGCTTGAGATTCAGAAAGAGGAAGGAAAAGTCCAAGGTCAGCTCAACAACACAGACTCCAGCCAGTACATCCGAGACCTCAAGGACCAGATAGGAGATCTCAAACATGAGATCCGATGCTTAAGAGGGCAGCAGGGCTTACCCGGCCAAGCCAGTTTTGACGGGATTCATATAGTCAATCACTATGGAGGGGACAACGAATCCTACCAGTCCTCTGATGAAGACGGAGTGAAGCTGTCGCCCCAGCTGACCAGTCATCAGGTTAGAGGCCGGATCACACTACATCCAAACCTGGAGGACTCAGAAAGTGAGGGTGATGAGGAGGGAGATGCCCTACGACTTAGCGTGCCCTCAAATGGCAGCCATAAGACGACTACAGTGTGATCATCTGGATTGGTGACACAAACTGCCATCGAAGGTTTGGGAAGGAGAGCGGTGAGCTTTGCCTTTTAAATCTGCCTACAGCATTGAGCACGGGACTCGAACTGGAGAACTTGAAAAGCCCCTCGTTCATCTTCACAAACGGACTTACGGAGTCATATCTTTCTCAAGGTCACGGTTTACatctgcatttgttttgtttttgccaaaaTGCGTCAGATGTTTGTCCTGGCACCAGTTTTTAATTTTGGCCTCACAAAAGACGACCGATAGGCCTGTTTAGGCTCTTTGAGACCCTTGTagtaaaaatcaacattttgtgGCAGGAGATTCCCAAACCTTAAAAAAGGGGGTGTTTCTAATACCCCACGATTTTTTCACATTATGAGAAGCAATTTTGTATAGCGTAGTGTTTTATGCATTAAGAATTTGCATTGtcatagcttttattttttaaatcatcctttttttaacaaaccacAACAAAGCAGTGAATGCATACCTTTTGAGGGAAACGTATTACGGAACACTATTAtctttaaatgcacattaaactGTTCCATATTAATACAGTGGTGTCATATCGTAAGTTAGCAAGCCTCGTTTTTCTGGCATGAATTATACGATCGGGGGTCTTGAACGCAATAAATGTGGGTCAAGGAACCAGCATCtgtgtaaatatgtacatgtttcgattttttttttttttgttccatctCCATTATTACTTGAAAATATGTATTCAATGGATGTCATGTctatattgtaatgtattgtaCAGTTAAGTTGAAAGGGATGTATTACTGAATTGGGAGGTCTTTGGAGGCAAAAGCTTTTCCTGGCACACTGCTGTCCAGTAACTCTTATGTACTGTAGCTTTGATGTAGTCGGTTCTCCATTTCACAGAAtggagtttttgttttgtgcctGGAAACATTCAATGGAATCCTTGCTGATTTACTATATTTCTACAGTGTGTGGTATGCTGAGCATGTTATGAATCATGAATACCTGCAAACTGATGGAGTCGAAGGCAGGGAGTGCTGGTTTGGTGGAACAACgttctcattttttttctggccTTACTTAAGCCAAGCACTCACAGGCAACGAGAAGACAAGTACACAGACTACccctccttttcttttctttttctattcatatttGTACCAACTAGCTTCTGAGTCGGTTTGCTTTTTTGCACAGATGACGCGCATATCACTTCAACAATGGAAACTACTAATGTTCCCAGTTTTTTGTCAATTGAGCTTAACTCTACATTGTCGTTTTCCTCCAATGAGTTCGTGTGTCTCAGTGGTTCATTTGAAGACTTTGGAAATCCATTTCGAAGCAAAGGAATGAAGTTATTTCACATCAGCCTGCTGTTTCTGAGGTTGTGCTTGGCTGGAGATAAATAACACCCGAGAACAAGCCTTAAAACCCATTGTGATAGATGTTGGTGCACTATTTGCCCATAAGTAGGCTAGTTCACCTACGAAAACGAGACTTTGCAAAACAACCGTGCGAAGCACTGAACACTAAAGTGATTTAACGTAATTgcgcaaaaaaacattatttaatctaaattaaaaccTTACGAGAAATGAAATTCCTGTGGAATGTACCTGTGGGCATCGGAGGCTTTACAGACTTGACAGAGCGAGATAAGTGTCTTGAAGATGATGGATATGATGATtcagaacacaataaaaatatcatttgatAGTG

Function

GO:      GO:0005097,GO:0032313

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 138614 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 141352 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 141955 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 142485 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 143066 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 1504 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 157898 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 162059 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 182762 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 288232 13823672 ~ 13835591 (-) False LOC122347350
XM_043242777.1 mRNA downstream 539 13489950 ~ 13495596 (-) True gfi1ab
XM_043242546.1 mRNA downstream 17224 13471896 ~ 13478911 (-) True glmnb
XM_043242215.1 mRNA downstream 79648 13407566 ~ 13416487 (-) True tomm70a
XM_043241139.1 mRNA downstream 90264 13390703 ~ 13405871 (-) False tbc1d23
XM_043242776.1 mRNA upstream 7767 13543207 ~ 13561025 (-) False dipk1ab
XM_043242774.1 mRNA upstream 7767 13543207 ~ 13560998 (-) False dipk1ab
XM_043242775.1 mRNA upstream 7767 13543207 ~ 13560996 (-) True dipk1ab
XM_043242247.1 mRNA upstream 26605 13562045 ~ 13569922 (-) True zbtb11
XM_043241276.1 mRNA upstream 43352 13578792 ~ 13585368 (-) True dpt
unassigned_transcript_1263 other downstream 28196 13467868 ~ 13467939 (-) True trnaa-cgc_55
unassigned_transcript_1262 other downstream 28570 13467494 ~ 13467565 (-) True trnaa-ugc_115
unassigned_transcript_1261 other downstream 28909 13467155 ~ 13467226 (-) True trnaa-ugc_114
unassigned_transcript_1260 other downstream 29078 13466986 ~ 13467057 (-) True trnaa-cgc_54
unassigned_transcript_1259 other downstream 29270 13466794 ~ 13466865 (-) True trnaa-cgc_53
TU66636 other upstream 133088 13668528 ~ 13681274 (-) False tmem131
TU66983 other upstream 625035 14160475 ~ 14193166 (-) True G45257
TU67455 other upstream 1793527 15328967 ~ 15330817 (-) False LOC122347580
TU67521 other upstream 2068470 15603910 ~ 15605470 (-) True G45606
TU67688 other upstream 2523528 16058968 ~ 16059767 (-) True G45730

Expression Profile