RNA id: XM_043242776.1



Basic Information


Item Value
RNA id XM_043242776.1
length 2082
RNA type mRNA
GC content 0.47
exon number 6
gene id dipk1ab
representative False

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13543207 ~ 13561025 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCGAGCGGCTGAGCGCAGATGTTGCTCATCGCGCGTGAGGTGCTGCGCCCGAGGAGCCTCACCActcttcatcatcctcctctctctctctctctctctctctctctctctctctctctccccccatGGCGAGAAAGACCTTGGCTTGGTTAGCGCTGTGAAATGTGGTGTTTCGATCATGGCACGGGGTCTGATACCGTGGATCTGGCTCAAGCGACCCGTTTATATCCAGGCCCGGTTCTCTTACCTACACATGAAGTACCTGTTTTTTTCCTGGTTGGCTGTTTTCGTGGGAAGCTGGGTGGTGTACGTGGAATACTCTTCATACACAGAGCTGTGCCGTGGACTTGAGTGCAAGAACACTATTTGCGATAAATTCCAGAAGGGGGTGATCGATGGTTCAGCCTGCAACAGCTTGTGTGAGAAGGACACTCTTTATTTGGGAAAGTGTCTCTCTGCCAAACCAAGTAATCAGGTATATTCTGGCAGTTGGGGGGATATGGAAGGAATCATAAAGTGCCAGATGGAGGAGGACCCTCATTACGATTTGGGTGCAGAACTGGAGCCCCGAAAAGAATCTGCCTCCTTTAACAGGCCGACCAAAGGGACATCAATGGAAAAGTtcaaagagatggtcttcagcCATCTGAAGGCAAAAGTGGGAGACCAAGCCAGCTTAGCAGATCTGGTGACCCTTGTGCTTGGAGTTGCAGACAGCAACAAGGACGGCCAGATCTCCCTGTCGGAAGCACATTCTGCTTGGGCTTTACTGCAGCTGAACGAATTCCTGATGTCCATTGTGCTGCAGGAGCGAGAGCACACTCCCAGGCTGCTGGGCTTCTGCGGGGACTTGTACGTGATGGAAAAGGTGCCTTACGTACCCCTCTATGGCGTCAGCCTTCCGTGGCTGGTGGAGCTGTGGATTCCGAACAGCCTGCGACGGAGCATCGACCAATGGGCCGCCCCATCCTGGCCTCGCAAGGCCAAGATAGCTATCGGTCTGTTTGAGCTCGTCGAGGACCTCTTCCACGGCACGTTCGGAAGTTTCCTCATGTGCGACGTGAGTGCTGCGGGGTTTGGTTATACAGAGCGCCACGATATAAAGGTGGTGGACGCAAGGCGTATTGTTCCGGAAGCTGCTTTTCAGGAAGTGATGCGTGAACGGCGGTGCGAAGAGGACAGTGACTGCACGTACGGACGAGACTGCCTCACTTCCTGTGATCTCACGAAGCACCGCTGCACTACGGAGGTCACACAGCCCAATCTGGCGAAAGTATGTAGCACACTGAAGAACTATCTTCTGTACGGCGCACCATCAGACGTTAAAGACGAACTGGAGAAACAGTTATACGCCTGCATTGCTCTCAGAGGCGCCAGCGAACAGATGGAAATGGAACACTCCTTGATTCTCAACAACCTCAAAACTCTGCTTTGGAAGAAGATATCTCACACCAAGGACTCGTAATGATATATAGAACAAAGTTATTGTTCTTATACAGAACACAAGAGATATGAACAAGGGATGGCATCGGACCATCTATGGATTGTCTAAtatgattatgtatttttatttttggtctgCATTTGCAGAGTACTGTTAATATAGCCTTCGTGGCACCTTGTTTTGGTACTTCGCCCAATCTTGACTCAATCCCAAATTATAAAAGCTTAGGCTGCAGAGAGATACTGCCTCTGCTAATGCATGTCCCTCCACTGCCAAgagaaaatgacaaattataatTCTTCCTGCGGATTCTTGTTCGGGAAACTGAGACAATCAAGCTGTGTCTAGTCCAGAGGTTTTCAAACTTGAGACGCCTATTTAGCagaatattgttttttacaaaatgtttttgggGCAGTCTAAAGACAACATAAATTGAGAAATatgttgacattttttatttcattttacttaattttttaatgatttctaaagattggtcagatttatttttctcaaagtCCAGGTATTAAatctaacttttattttgatggtgtATACATATTACTATTcagtagaaagaaaaaaaaatgttctgaatctaatacaaaataaataccgTAAATATAGACTTTTAA

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 185686 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 188424 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 189027 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 189557 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 190138 13352462 ~ 13353069 (-) True G44938
TU66648 lncRNA upstream 132313 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 136474 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 157177 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 262647 13823672 ~ 13835591 (-) False LOC122347350
XR_006251213.1 lncRNA upstream 262647 13823672 ~ 13835591 (-) False LOC122347350
XM_043242771.1 mRNA downstream 7767 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA downstream 7767 13496135 ~ 13535440 (-) False evi5b
XM_043242772.1 mRNA downstream 7767 13497947 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA downstream 8466 13496135 ~ 13534741 (-) True evi5b
XM_043242770.1 mRNA downstream 17215 13496135 ~ 13525992 (-) False evi5b
XM_043242247.1 mRNA upstream 1020 13562045 ~ 13569922 (-) True zbtb11
XM_043241276.1 mRNA upstream 17767 13578792 ~ 13585368 (-) True dpt
XM_043241546.1 mRNA upstream 46491 13607516 ~ 13638943 (-) False nme7
XM_043241545.1 mRNA upstream 46588 13607613 ~ 13638945 (-) True nme7
XM_043241544.1 mRNA upstream 94235 13655260 ~ 13681294 (-) False tmem131
unassigned_transcript_1263 other downstream 75268 13467868 ~ 13467939 (-) True trnaa-cgc_55
unassigned_transcript_1262 other downstream 75642 13467494 ~ 13467565 (-) True trnaa-ugc_115
unassigned_transcript_1261 other downstream 75981 13467155 ~ 13467226 (-) True trnaa-ugc_114
unassigned_transcript_1260 other downstream 76150 13466986 ~ 13467057 (-) True trnaa-cgc_54
unassigned_transcript_1259 other downstream 76342 13466794 ~ 13466865 (-) True trnaa-cgc_53
TU66636 other upstream 107503 13668528 ~ 13681274 (-) False tmem131
TU66983 other upstream 599450 14160475 ~ 14193166 (-) True G45257
TU67455 other upstream 1767942 15328967 ~ 15330817 (-) False LOC122347580
TU67521 other upstream 2042885 15603910 ~ 15605470 (-) True G45606
TU67688 other upstream 2497943 16058968 ~ 16059767 (-) True G45730

Expression Profile


XM_043242776.1 Expression in all Baseline Samples

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XM_043242776.1 Expression in each Bioproject

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XM_043242776.1 Expression in each Sample
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