RNA id: XM_043242786.1


Basic Information

Item Value
RNA id XM_043242786.1
length 2822
RNA type mRNA
GC content 0.40
exon number 13
gene id mpl
representative False

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16292195 ~ 16298925 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTCTAAAAACATAAAGTACTGAACACTGACATATCtagatatttaaaaagtcataTGTATGGATGCCCTATGTACATGATGGATTCAGCACTTGCCTGGTGGATACTTTTTTCCTGTCTGATCGAGCAGGTGCATTTAGAGCCTCAACTATCAAAGCAAGAATTTGTTCTCTTGGCTGTGGATAAAGACCCAAAATGTTTCACCAGGAATCTAGACGATTTCACTTGCTTTTGGGAAGCGCCTGCTGGAAAGTCCTATTATTTTGTCTACATAATatcatcaaaagaaaaaatatgtgaTGTGAAACAGCAATCTTATGAGGAGAAAAAGGTCCTGAATATTTGCACATTCCCATCAATCGATGTCTTCACGTATGTCGAGATGCTCCTCAGAGTGATAGACAGAGATACCAACACAACCATCTACAATCGCACCGTCAGTGTGGAGGATCAGCTTTTTCTGTATCCTCCAACAAATATTTCCCTTCATCCCACTGGCGACGTCGGCCAAATGttagttgaatggaaaaaaactaaaagctttCCAATGACCATGCAGTATGAAATTCATTACAGATCCAAACACACGTCAGGCACAGTTAAACTGGTGTCAAAACACTCCCACAAGCTTGTGTCTCTGGTCGCAGGAGAAAACTGCACAGTGCAAGTGAGAGTCAAGGCTGGACGTGGTTTTTGGAGTGACTGGTCAAGTACTGTAACAGCTATGGTGCCACAAACAGCAGGTGATATAAAGTTGCGGTGCCACACTCCAGATCTGCATCAAGTATTTTGCCAATGGAGAGGAGACATTTATGACGACGGCGGATACAGCTTCCACTACAGGCAAATAAACAGAAGTCTGTGGGATAGCTGGAAATTGTGTTCCAGGGACAACGACACCGTCCATCAATGTGTCTTGTATGGGCAAGAGCCCAGTATCTATCAGTTTTACCTCAGTGTTGGATTGCAACCATTCGGTCGAACATTTTACGCAGAAACATTCAGTATGAACAGCAGCATCAAGACAAGGCCTCCAGAAGGTCTGAAGGCACAGACCAAGGAAGGACGGCTTTGTTTGAAATGGGATTCGCCCATTTTGAAGATCTCGCAGTATCTAAAGTACCAGATTCGATATCAGCGAGAAGGAGAGAGTGAGTGGAAAGATTTTACAACACCCAGTTCCAAGAGCAGCACTTGCCTGGATGTACACAGAGGGAGCCAATACACTATCCAGATTCGAACCCAACCCGATGGAACGGTGTACAGCGGAGACTGGAGTGACTGGTCGAAACCTCTCACCGCCCTCTTACCTTTAGGCAAAGAGTGGATCTTCATTGTCTGTATACCAGTGGCTCTGCTCATCATTGCTTCTGCAACGATCTCCTTCTTTTCCCGATACTTCCGAAAGTTCAAAAAGTCCTTATGGCCATCAGTCCCAAACCTTAACAAGGTGCTGGAAAGCTTCATGACCGATATCAATGGATCACATTGGGAGCCAACCTTCAACACCAAGCAATGTGACGATGAAACTGCTACATCAGTGTTGGAGATTCTGCCCGAGAAAGAAACTTCAGTAAAATCCTGGAATGACTATGTGTATGGGGATGCTGCTTTATCTCATCTGGCTAATGAAAAACTACACTGTTGCCCCAGTACCTGTTCTACCACCTTCCCAGAATGCAGCACAAATATTCTCAACCATTCCTATCTCCTTCTGGCGGAACAGTCTGATCTTGAAGAGTATCACTCAGCCTGTCGCCAGTATACCAATATGGAGATCACAGCAGAAGCGTATGAAGCAAATGGAGAGTGAGGTTCTCATAAATTAAGCTCATAAGcctctatatgtatatataaagttttgGATAAAATCTTACAAATTCCAAGTTTCTGTGGAATGAGAGAAGCAGCATGTGAGACTCTAAGAAACAGACGTTTTAAGTAGAAATTGTTCAATGCATGAACCTTAATCATCACCAAGAAGGAACTGCACTTAAGTTTCATCATACCACAAACCAAATCATTCAAGAATATCTAGACATGCCAAATGTCAGACCACTGGCTTGCAAAAGAATAATAAGAAAGTAAACGTGCATCATATAAATGGTATTTTCAAATTTTAGGTTACCAAAAACACCATCAATGGCATGTTATCAAAGTACAACTTGCTTATCGGTTTGCAAACTCAAACATGTACATTAATGGGTGTCAGTGGGGTATTTTGTGACTTCAAAAGCGAAAATGtgacatttgttttctttgatgaggcttttagattttttagtCAAATATTTACTTCAAAGTTGTGGGAGTACTTTTATAGACTAACACCTTGGTTGTGTTCGTggactataaatattttttcctggTACTTAAATTGATATCATACAAATGTTAACAGGTTTTTATGTTAATGGTTGTACTTTGCACAGACAATTGCTGGTAAACACATTTATCACACCGGTCTTATGTTAATGTGATGGGTGTGAAAGCGTTTTaattagtaagatttttttggTAATTAAGGATGTTACTGGTATTTTGAATAGCGCTTAAGCGTGATTTAACCCTTAATATTCATTAACTTGCATTTTAGCTATATATGTTTTAGTGAATCTTTAGCAATTACTATGCTTGTTATAGTCGCAATATGTTATCTGAAATACTGATTACGAAGCAATTTATGTCTCACGATGAGGTCTGATCAGTAAATAGCTTTATTGTATCAAGACATCACAAGTACAATCTGAAAAATATCCAACAATATTGTGCATATTATGaagaattgtacattttacagtcattaaatgataaacatcaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU67717 lncRNA downstream 21087 16270902 ~ 16271108 (-) True G45753
TU67716 lncRNA downstream 22803 16268915 ~ 16269392 (-) True G45752
TU67715 lncRNA downstream 24653 16267183 ~ 16267542 (-) True G45751
TU67664 lncRNA downstream 173609 15941258 ~ 16118586 (-) True G45709
TU67746 lncRNA upstream 21544 16320413 ~ 16322805 (-) True G45770
TU67946 lncRNA upstream 888587 17187456 ~ 17187794 (-) True G45897
TU67960 lncRNA upstream 944811 17243680 ~ 17246369 (-) False LOC122347244
TU67974 lncRNA upstream 1114169 17413038 ~ 17414139 (-) False brinp3a.2
TU67995 lncRNA upstream 1215769 17514638 ~ 17518605 (-) True G45930
XM_043242791.1 mRNA downstream 8049 16281389 ~ 16284146 (-) True prpf38a
XM_043242788.1 mRNA downstream 11278 16277857 ~ 16280917 (-) False akr1a1b
XM_043242787.1 mRNA downstream 11443 16277857 ~ 16280752 (-) True akr1a1b
XM_043242790.1 mRNA downstream 11826 16277857 ~ 16280369 (-) False akr1a1b
XM_043242668.1 mRNA downstream 14895 16272017 ~ 16277300 (-) True LOC122347419
XM_043242792.1 mRNA upstream 710 16299579 ~ 16311653 (-) True tie1
XM_043242684.1 mRNA upstream 41436 16340305 ~ 16350269 (-) False LOC122347428
XM_043242685.1 mRNA upstream 41436 16340305 ~ 16350028 (-) False LOC122347428
XM_043242683.1 mRNA upstream 41436 16340305 ~ 16350025 (-) True LOC122347428
XM_043242527.1 mRNA upstream 62298 16361167 ~ 16364019 (-) True fam183a
TU67689 other downstream 231729 16059893 ~ 16060466 (-) True G45731
TU67688 other downstream 232428 16058968 ~ 16059767 (-) True G45730
TU67521 other downstream 686725 15603910 ~ 15605470 (-) True G45606
TU67455 other downstream 961378 15328967 ~ 15330817 (-) False LOC122347580
TU66983 other downstream 2099029 14160475 ~ 14193166 (-) True G45257
TU67772 other upstream 62331 16361200 ~ 16364020 (-) False fam183a
TU67937 other upstream 517771 16816640 ~ 16830208 (-) True rgs8
TU67944 other upstream 887820 17186689 ~ 17187318 (-) True G45895
TU67962 other upstream 1008946 17307815 ~ 17308478 (-) True G45910
XR_006251188.1 other upstream 1444846 17743715 ~ 17774107 (-) False opa1

Expression Profile