RNA id: unassigned_transcript_1093



Basic Information


Item Value
RNA id unassigned_transcript_1093
length 72
RNA type tRNA
GC content 0.56
exon number 1
gene id trnaa-cgc_1
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13420829 ~ 13420900 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 63308 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 66046 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 66649 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 67179 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 67760 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 116044 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 272438 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 276599 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 297302 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 402772 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 4342 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 14933 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 50996 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 69050 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 75235 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 75235 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 75235 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1092 other downstream 111 13420647 ~ 13420718 (-) True trnaa-cgc
unassigned_transcript_1091 other downstream 449280 12971478 ~ 12971549 (-) True trnap-cgg_1
unassigned_transcript_1090 other downstream 449675 12971083 ~ 12971154 (-) True trnap-ugg_5
unassigned_transcript_1088 other downstream 1448049 11972709 ~ 11972780 (-) True trnap-ugg_4
unassigned_transcript_1087 other downstream 1448278 11972480 ~ 11972551 (-) True trnag-ucc_1
unassigned_transcript_1094 other upstream 420 13421320 ~ 13421391 (-) True trnaa-ugc_1
unassigned_transcript_1095 other upstream 724 13421624 ~ 13421695 (-) True trnaa-cgc_2
unassigned_transcript_1096 other upstream 905 13421805 ~ 13421876 (-) True trnaa-cgc_3
unassigned_transcript_1097 other upstream 2004 13422904 ~ 13422975 (-) True trnaa-ugc_2
unassigned_transcript_1098 other upstream 3454 13424354 ~ 13424425 (-) True trnaa-ugc_3

Expression Profile