RNA id: unassigned_transcript_1101



Basic Information


Item Value
RNA id unassigned_transcript_1101
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_6
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13425073 ~ 13425144 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 67552 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 70290 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 70893 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 71423 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 72004 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 111800 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 268194 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 272355 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 293058 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 398528 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 8586 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 19177 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 46752 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 64806 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 70991 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 70991 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 70991 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1100 other downstream 107 13424895 ~ 13424966 (-) True trnaa-ugc_5
unassigned_transcript_1099 other downstream 287 13424715 ~ 13424786 (-) True trnaa-ugc_4
unassigned_transcript_1098 other downstream 648 13424354 ~ 13424425 (-) True trnaa-ugc_3
unassigned_transcript_1097 other downstream 2098 13422904 ~ 13422975 (-) True trnaa-ugc_2
unassigned_transcript_1096 other downstream 3197 13421805 ~ 13421876 (-) True trnaa-cgc_3
unassigned_transcript_1102 other upstream 110 13425254 ~ 13425325 (-) True trnaa-ugc_7
unassigned_transcript_1103 other upstream 680 13425824 ~ 13425895 (-) True trnaa-cgc_4
unassigned_transcript_1104 other upstream 860 13426004 ~ 13426075 (-) True trnaa-ugc_8
unassigned_transcript_1105 other upstream 1041 13426185 ~ 13426256 (-) True trnaa-ugc_9
unassigned_transcript_1106 other upstream 1396 13426540 ~ 13426611 (-) True trnaa-cgc_5