RNA id: unassigned_transcript_1104



Basic Information


Item Value
RNA id unassigned_transcript_1104
length 72
RNA type tRNA
GC content 0.53
exon number 1
gene id trnaa-ugc_8
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13426004 ~ 13426075 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgtaTGCTTTGCATGTaagaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 68483 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 71221 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 71824 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 72354 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 72935 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 110869 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 267263 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 271424 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 292127 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 397597 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 9517 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 20108 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 45821 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 63875 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 70060 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 70060 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 70060 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1103 other downstream 109 13425824 ~ 13425895 (-) True trnaa-cgc_4
unassigned_transcript_1102 other downstream 679 13425254 ~ 13425325 (-) True trnaa-ugc_7
unassigned_transcript_1101 other downstream 860 13425073 ~ 13425144 (-) True trnaa-ugc_6
unassigned_transcript_1100 other downstream 1038 13424895 ~ 13424966 (-) True trnaa-ugc_5
unassigned_transcript_1099 other downstream 1218 13424715 ~ 13424786 (-) True trnaa-ugc_4
unassigned_transcript_1105 other upstream 110 13426185 ~ 13426256 (-) True trnaa-ugc_9
unassigned_transcript_1106 other upstream 465 13426540 ~ 13426611 (-) True trnaa-cgc_5
unassigned_transcript_1107 other upstream 772 13426847 ~ 13426918 (-) True trnaa-ugc_10
unassigned_transcript_1108 other upstream 955 13427030 ~ 13427101 (-) True trnaa-ugc_11
unassigned_transcript_1109 other upstream 1623 13427698 ~ 13427769 (-) True trnaa-ugc_12