RNA id: unassigned_transcript_1108



Basic Information


Item Value
RNA id unassigned_transcript_1108
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_11
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13427030 ~ 13427101 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 69509 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 72247 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 72850 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 73380 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 73961 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 109843 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 266237 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 270398 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 291101 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 396571 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 10543 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 21134 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 44795 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 62849 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 69034 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 69034 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 69034 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1107 other downstream 112 13426847 ~ 13426918 (-) True trnaa-ugc_10
unassigned_transcript_1106 other downstream 419 13426540 ~ 13426611 (-) True trnaa-cgc_5
unassigned_transcript_1105 other downstream 774 13426185 ~ 13426256 (-) True trnaa-ugc_9
unassigned_transcript_1104 other downstream 955 13426004 ~ 13426075 (-) True trnaa-ugc_8
unassigned_transcript_1103 other downstream 1135 13425824 ~ 13425895 (-) True trnaa-cgc_4
unassigned_transcript_1109 other upstream 597 13427698 ~ 13427769 (-) True trnaa-ugc_12
unassigned_transcript_1110 other upstream 778 13427879 ~ 13427950 (-) True trnaa-ugc_13
unassigned_transcript_1111 other upstream 1144 13428245 ~ 13428316 (-) True trnaa-cgc_6
unassigned_transcript_1112 other upstream 1336 13428437 ~ 13428508 (-) True trnaa-ugc_14
unassigned_transcript_1113 other upstream 1515 13428616 ~ 13428687 (-) True trnaa-ugc_15