RNA id: unassigned_transcript_1172



Basic Information


Item Value
RNA id unassigned_transcript_1172
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_62
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13445154 ~ 13445225 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 87633 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 90371 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 90974 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 91504 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 92085 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 91719 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 248113 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 252274 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 272977 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 378447 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 28667 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 39258 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 26671 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 44725 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 50910 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 50910 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 50910 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1171 other downstream 108 13444975 ~ 13445046 (-) True trnaa-cgc_18
unassigned_transcript_1170 other downstream 294 13444789 ~ 13444860 (-) True trnaa-ugc_61
unassigned_transcript_1169 other downstream 434 13444649 ~ 13444720 (-) True trnaa-ugc_60
unassigned_transcript_1168 other downstream 731 13444352 ~ 13444423 (-) True trnaa-ugc_59
unassigned_transcript_1167 other downstream 925 13444158 ~ 13444229 (-) True trnaa-ugc_58
unassigned_transcript_1173 other upstream 110 13445335 ~ 13445406 (-) True trnaa-ugc_63
unassigned_transcript_1174 other upstream 438 13445663 ~ 13445734 (-) True trnaa-ugc_64
unassigned_transcript_1175 other upstream 793 13446018 ~ 13446089 (-) True trnaa-ugc_65
unassigned_transcript_1176 other upstream 984 13446209 ~ 13446282 (-) True trnaa-cgc_19
unassigned_transcript_1177 other upstream 1352 13446577 ~ 13446648 (-) True trnaa-ugc_66