RNA id: unassigned_transcript_1186



Basic Information


Item Value
RNA id unassigned_transcript_1186
length 72
RNA type tRNA
GC content 0.56
exon number 1
gene id trnaa-cgc_23
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13448923 ~ 13448994 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 91402 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 94140 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 94743 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 95273 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 95854 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 87950 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 244344 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 248505 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 269208 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 374678 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 32436 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 43027 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 22902 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 40956 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 47141 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 47141 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 47141 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1185 other downstream 111 13448741 ~ 13448812 (-) True trnaa-cgc_22
unassigned_transcript_1184 other downstream 415 13448437 ~ 13448508 (-) True trnaa-cgc_21
unassigned_transcript_1183 other downstream 753 13448099 ~ 13448170 (-) True trnaa-ugc_71
unassigned_transcript_1182 other downstream 1080 13447772 ~ 13447843 (-) True trnaa-ugc_70
unassigned_transcript_1181 other downstream 1448 13447404 ~ 13447475 (-) True trnaa-cgc_20
unassigned_transcript_1187 other upstream 111 13449105 ~ 13449176 (-) True trnaa-ugc_72
unassigned_transcript_1188 other upstream 291 13449285 ~ 13449356 (-) True trnaa-ugc_73
unassigned_transcript_1189 other upstream 437 13449431 ~ 13449502 (-) True trnaa-ugc_74
unassigned_transcript_1190 other upstream 781 13449775 ~ 13449846 (-) True trnaa-ugc_75
unassigned_transcript_1191 other upstream 1084 13450078 ~ 13450149 (-) True trnaa-ugc_76