RNA id: unassigned_transcript_1189



Basic Information


Item Value
RNA id unassigned_transcript_1189
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_74
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13449431 ~ 13449502 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 91910 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 94648 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 95251 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 95781 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 96362 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 87442 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 243836 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 247997 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 268700 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 374170 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 32944 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 43535 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 22394 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 40448 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 46633 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 46633 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 46633 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1188 other downstream 75 13449285 ~ 13449356 (-) True trnaa-ugc_73
unassigned_transcript_1187 other downstream 255 13449105 ~ 13449176 (-) True trnaa-ugc_72
unassigned_transcript_1186 other downstream 437 13448923 ~ 13448994 (-) True trnaa-cgc_23
unassigned_transcript_1185 other downstream 619 13448741 ~ 13448812 (-) True trnaa-cgc_22
unassigned_transcript_1184 other downstream 923 13448437 ~ 13448508 (-) True trnaa-cgc_21
unassigned_transcript_1190 other upstream 273 13449775 ~ 13449846 (-) True trnaa-ugc_75
unassigned_transcript_1191 other upstream 576 13450078 ~ 13450149 (-) True trnaa-ugc_76
unassigned_transcript_1192 other upstream 758 13450260 ~ 13450331 (-) True trnaa-cgc_24
unassigned_transcript_1193 other upstream 941 13450443 ~ 13450514 (-) True trnaa-ugc_77
unassigned_transcript_1194 other upstream 1122 13450624 ~ 13450695 (-) True trnaa-ugc_78