RNA id: unassigned_transcript_1198



Basic Information


Item Value
RNA id unassigned_transcript_1198
length 72
RNA type tRNA
GC content 0.56
exon number 1
gene id trnaa-cgc_26
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13451414 ~ 13451485 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 93893 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 96631 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 97234 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 97764 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 98345 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 85459 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 241853 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 246014 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 266717 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 372187 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 34927 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 45518 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 20411 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 38465 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 44650 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 44650 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 44650 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1197 other downstream 234 13451109 ~ 13451180 (-) True trnaa-cgc_25
unassigned_transcript_1196 other downstream 425 13450918 ~ 13450989 (-) True trnaa-ugc_80
unassigned_transcript_1195 other downstream 572 13450771 ~ 13450842 (-) True trnaa-ugc_79
unassigned_transcript_1194 other downstream 719 13450624 ~ 13450695 (-) True trnaa-ugc_78
unassigned_transcript_1193 other downstream 900 13450443 ~ 13450514 (-) True trnaa-ugc_77
unassigned_transcript_1199 other upstream 111 13451596 ~ 13451667 (-) True trnaa-ugc_81
unassigned_transcript_1200 other upstream 293 13451778 ~ 13451849 (-) True trnaa-ugc_82
unassigned_transcript_1201 other upstream 474 13451959 ~ 13452030 (-) True trnaa-ugc_83
unassigned_transcript_1202 other upstream 620 13452105 ~ 13452176 (-) True trnaa-ugc_84
unassigned_transcript_1203 other upstream 767 13452252 ~ 13452323 (-) True trnaa-ugc_85