RNA id: unassigned_transcript_1200



Basic Information


Item Value
RNA id unassigned_transcript_1200
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_82
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13451778 ~ 13451849 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggaagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 94257 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 96995 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 97598 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 98128 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 98709 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 85095 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 241489 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 245650 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 266353 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 371823 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 35291 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 45882 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 20047 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 38101 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 44286 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 44286 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 44286 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1199 other downstream 111 13451596 ~ 13451667 (-) True trnaa-ugc_81
unassigned_transcript_1198 other downstream 293 13451414 ~ 13451485 (-) True trnaa-cgc_26
unassigned_transcript_1197 other downstream 598 13451109 ~ 13451180 (-) True trnaa-cgc_25
unassigned_transcript_1196 other downstream 789 13450918 ~ 13450989 (-) True trnaa-ugc_80
unassigned_transcript_1195 other downstream 936 13450771 ~ 13450842 (-) True trnaa-ugc_79
unassigned_transcript_1201 other upstream 110 13451959 ~ 13452030 (-) True trnaa-ugc_83
unassigned_transcript_1202 other upstream 256 13452105 ~ 13452176 (-) True trnaa-ugc_84
unassigned_transcript_1203 other upstream 403 13452252 ~ 13452323 (-) True trnaa-ugc_85
unassigned_transcript_1204 other upstream 594 13452443 ~ 13452514 (-) True trnaa-cgc_27
unassigned_transcript_1205 other upstream 899 13452748 ~ 13452819 (-) True trnaa-cgc_28