RNA id: unassigned_transcript_1203



Basic Information


Item Value
RNA id unassigned_transcript_1203
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_85
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13452252 ~ 13452323 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggttgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 94731 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 97469 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 98072 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 98602 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 99183 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 84621 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 241015 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 245176 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 265879 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 371349 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 35765 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 46356 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 19573 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 37627 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 43812 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 43812 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 43812 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1202 other downstream 76 13452105 ~ 13452176 (-) True trnaa-ugc_84
unassigned_transcript_1201 other downstream 222 13451959 ~ 13452030 (-) True trnaa-ugc_83
unassigned_transcript_1200 other downstream 403 13451778 ~ 13451849 (-) True trnaa-ugc_82
unassigned_transcript_1199 other downstream 585 13451596 ~ 13451667 (-) True trnaa-ugc_81
unassigned_transcript_1198 other downstream 767 13451414 ~ 13451485 (-) True trnaa-cgc_26
unassigned_transcript_1204 other upstream 120 13452443 ~ 13452514 (-) True trnaa-cgc_27
unassigned_transcript_1205 other upstream 425 13452748 ~ 13452819 (-) True trnaa-cgc_28
unassigned_transcript_1206 other upstream 607 13452930 ~ 13453001 (-) True trnaa-cgc_29
unassigned_transcript_1207 other upstream 789 13453112 ~ 13453183 (-) True trnaa-ugc_86
unassigned_transcript_1208 other upstream 970 13453293 ~ 13453364 (-) True trnaa-ugc_87