RNA id: unassigned_transcript_1209



Basic Information


Item Value
RNA id unassigned_transcript_1209
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_88
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13453440 ~ 13453511 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 95919 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 98657 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 99260 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 99790 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 100371 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 83433 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 239827 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 243988 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 264691 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 370161 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 36953 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 47544 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 18385 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 36439 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 42624 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 42624 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 42624 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1208 other downstream 76 13453293 ~ 13453364 (-) True trnaa-ugc_87
unassigned_transcript_1207 other downstream 257 13453112 ~ 13453183 (-) True trnaa-ugc_86
unassigned_transcript_1206 other downstream 439 13452930 ~ 13453001 (-) True trnaa-cgc_29
unassigned_transcript_1205 other downstream 621 13452748 ~ 13452819 (-) True trnaa-cgc_28
unassigned_transcript_1204 other downstream 926 13452443 ~ 13452514 (-) True trnaa-cgc_27
unassigned_transcript_1210 other upstream 277 13453788 ~ 13453859 (-) True trnaa-ugc_89
unassigned_transcript_1211 other upstream 749 13454260 ~ 13454331 (-) True trnaa-cgc_30
unassigned_transcript_1212 other upstream 931 13454442 ~ 13454513 (-) True trnaa-cgc_31
unassigned_transcript_1213 other upstream 1113 13454624 ~ 13454695 (-) True trnaa-ugc_90
unassigned_transcript_1214 other upstream 1294 13454805 ~ 13454876 (-) True trnaa-ugc_91