RNA id: unassigned_transcript_1211



Basic Information


Item Value
RNA id unassigned_transcript_1211
length 72
RNA type tRNA
GC content 0.56
exon number 1
gene id trnaa-cgc_30
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13454260 ~ 13454331 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 96739 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 99477 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 100080 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 100610 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 101191 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 82613 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 239007 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 243168 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 263871 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 369341 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 37773 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 48364 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 17565 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 35619 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 41804 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 41804 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 41804 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1210 other downstream 401 13453788 ~ 13453859 (-) True trnaa-ugc_89
unassigned_transcript_1209 other downstream 749 13453440 ~ 13453511 (-) True trnaa-ugc_88
unassigned_transcript_1208 other downstream 896 13453293 ~ 13453364 (-) True trnaa-ugc_87
unassigned_transcript_1207 other downstream 1077 13453112 ~ 13453183 (-) True trnaa-ugc_86
unassigned_transcript_1206 other downstream 1259 13452930 ~ 13453001 (-) True trnaa-cgc_29
unassigned_transcript_1212 other upstream 111 13454442 ~ 13454513 (-) True trnaa-cgc_31
unassigned_transcript_1213 other upstream 293 13454624 ~ 13454695 (-) True trnaa-ugc_90
unassigned_transcript_1214 other upstream 474 13454805 ~ 13454876 (-) True trnaa-ugc_91
unassigned_transcript_1215 other upstream 724 13455055 ~ 13455126 (-) True trnaa-ugc_92
unassigned_transcript_1216 other upstream 871 13455202 ~ 13455273 (-) True trnaa-ugc_93