RNA id: unassigned_transcript_1217



Basic Information


Item Value
RNA id unassigned_transcript_1217
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-cgc_32
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13455394 ~ 13455465 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggtttaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 97873 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 100611 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 101214 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 101744 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 102325 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 81479 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 237873 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 242034 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 262737 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 368207 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 38907 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 49498 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 16431 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 34485 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 40670 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 40670 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 40670 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1216 other downstream 121 13455202 ~ 13455273 (-) True trnaa-ugc_93
unassigned_transcript_1215 other downstream 268 13455055 ~ 13455126 (-) True trnaa-ugc_92
unassigned_transcript_1214 other downstream 518 13454805 ~ 13454876 (-) True trnaa-ugc_91
unassigned_transcript_1213 other downstream 699 13454624 ~ 13454695 (-) True trnaa-ugc_90
unassigned_transcript_1212 other downstream 881 13454442 ~ 13454513 (-) True trnaa-cgc_31
unassigned_transcript_1218 other upstream 233 13455698 ~ 13455769 (-) True trnaa-cgc_33
unassigned_transcript_1219 other upstream 415 13455880 ~ 13455951 (-) True trnaa-cgc_34
unassigned_transcript_1220 other upstream 597 13456062 ~ 13456133 (-) True trnaa-ugc_94
unassigned_transcript_1221 other upstream 778 13456243 ~ 13456314 (-) True trnaa-ugc_95
unassigned_transcript_1222 other upstream 925 13456390 ~ 13456461 (-) True trnaa-ugc_96