RNA id: unassigned_transcript_1220



Basic Information


Item Value
RNA id unassigned_transcript_1220
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_94
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13456062 ~ 13456133 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggaagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 98541 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 101279 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 101882 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 102412 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 102993 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 80811 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 237205 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 241366 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 262069 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 367539 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 39575 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 50166 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 15763 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 33817 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 40002 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 40002 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 40002 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1219 other downstream 111 13455880 ~ 13455951 (-) True trnaa-cgc_34
unassigned_transcript_1218 other downstream 293 13455698 ~ 13455769 (-) True trnaa-cgc_33
unassigned_transcript_1217 other downstream 597 13455394 ~ 13455465 (-) True trnaa-cgc_32
unassigned_transcript_1216 other downstream 789 13455202 ~ 13455273 (-) True trnaa-ugc_93
unassigned_transcript_1215 other downstream 936 13455055 ~ 13455126 (-) True trnaa-ugc_92
unassigned_transcript_1221 other upstream 110 13456243 ~ 13456314 (-) True trnaa-ugc_95
unassigned_transcript_1222 other upstream 257 13456390 ~ 13456461 (-) True trnaa-ugc_96
unassigned_transcript_1223 other upstream 897 13457030 ~ 13457101 (-) True trnaa-cgc_35
unassigned_transcript_1224 other upstream 1078 13457211 ~ 13457282 (-) True trnaa-cgc_36
unassigned_transcript_1225 other upstream 1260 13457393 ~ 13457464 (-) True trnaa-ugc_97