RNA id: unassigned_transcript_1231



Basic Information


Item Value
RNA id unassigned_transcript_1231
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_100
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13458721 ~ 13458792 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggaagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 101200 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 103938 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 104541 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 105071 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 105652 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 78152 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 234546 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 238707 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 259410 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 364880 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 42234 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 52825 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 13104 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 31158 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 37343 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 37343 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 37343 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1230 other downstream 105 13458545 ~ 13458616 (-) True trnaa-cgc_39
unassigned_transcript_1229 other downstream 287 13458363 ~ 13458434 (-) True trnaa-cgc_38
unassigned_transcript_1228 other downstream 591 13458059 ~ 13458130 (-) True trnaa-cgc_37
unassigned_transcript_1227 other downstream 930 13457720 ~ 13457791 (-) True trnaa-ugc_99
unassigned_transcript_1226 other downstream 1076 13457574 ~ 13457645 (-) True trnaa-ugc_98
unassigned_transcript_1232 other upstream 109 13458901 ~ 13458972 (-) True trnaa-ugc_101
unassigned_transcript_1233 other upstream 595 13459387 ~ 13459458 (-) True trnaa-cgc_40
unassigned_transcript_1234 other upstream 899 13459691 ~ 13459762 (-) True trnaa-cgc_41
unassigned_transcript_1235 other upstream 1081 13459873 ~ 13459944 (-) True trnaa-ugc_102
unassigned_transcript_1236 other upstream 1867 13460659 ~ 13460730 (-) True trnaa-cgc_42