RNA id: unassigned_transcript_1238



Basic Information


Item Value
RNA id unassigned_transcript_1238
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_103
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13461022 ~ 13461093 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggaagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 103501 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 106239 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 106842 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 107372 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 107953 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 75851 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 232245 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 236406 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 257109 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 362579 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 44535 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 55126 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 10803 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 28857 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 35042 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 35042 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 35042 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1237 other downstream 111 13460840 ~ 13460911 (-) True trnaa-cgc_43
unassigned_transcript_1236 other downstream 292 13460659 ~ 13460730 (-) True trnaa-cgc_42
unassigned_transcript_1235 other downstream 1078 13459873 ~ 13459944 (-) True trnaa-ugc_102
unassigned_transcript_1234 other downstream 1260 13459691 ~ 13459762 (-) True trnaa-cgc_41
unassigned_transcript_1233 other downstream 1564 13459387 ~ 13459458 (-) True trnaa-cgc_40
unassigned_transcript_1239 other upstream 110 13461203 ~ 13461274 (-) True trnaa-ugc_104
unassigned_transcript_1240 other upstream 394 13461487 ~ 13461558 (-) True trnaa-ugc_105
unassigned_transcript_1241 other upstream 882 13461975 ~ 13462045 (-) True trnaa-cgc_44
unassigned_transcript_1242 other upstream 1064 13462157 ~ 13462228 (-) True trnaa-ugc_106
unassigned_transcript_1243 other upstream 1721 13462814 ~ 13462885 (-) True trnaa-cgc_45