RNA id: unassigned_transcript_1248



Basic Information


Item Value
RNA id unassigned_transcript_1248
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_108
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13464451 ~ 13464522 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggaagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 106930 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 109668 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 110271 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 110801 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 111382 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 72422 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 228816 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 232977 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 253680 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 359150 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 47964 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 58555 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 7374 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 25428 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 31613 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 31613 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 31613 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1247 other downstream 192 13464188 ~ 13464259 (-) True trnav-gac
unassigned_transcript_1246 other downstream 750 13463630 ~ 13463701 (-) True trnaa-cgc_47
unassigned_transcript_1245 other downstream 932 13463448 ~ 13463519 (-) True trnaa-cgc_46
unassigned_transcript_1244 other downstream 1237 13463143 ~ 13463214 (-) True trnaa-ugc_107
unassigned_transcript_1243 other downstream 1566 13462814 ~ 13462885 (-) True trnaa-cgc_45
unassigned_transcript_1249 other upstream 234 13464756 ~ 13464827 (-) True trnaa-cgc_48
unassigned_transcript_1250 other upstream 539 13465061 ~ 13465132 (-) True trnaa-cgc_49
unassigned_transcript_1251 other upstream 721 13465243 ~ 13465314 (-) True trnaa-cgc_50
unassigned_transcript_1252 other upstream 903 13465425 ~ 13465496 (-) True trnaa-ugc_109
unassigned_transcript_1253 other upstream 1084 13465606 ~ 13465677 (-) True trnaa-ugc_110