RNA id: unassigned_transcript_1249



Basic Information


Item Value
RNA id unassigned_transcript_1249
length 72
RNA type tRNA
GC content 0.53
exon number 1
gene id trnaa-cgc_48
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13464756 ~ 13464827 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatttagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggtttaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 107235 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 109973 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 110576 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 111106 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 111687 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 72117 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 228511 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 232672 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 253375 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 358845 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 48269 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 58860 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 7069 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 25123 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 31308 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 31308 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 31308 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1248 other downstream 234 13464451 ~ 13464522 (-) True trnaa-ugc_108
unassigned_transcript_1247 other downstream 497 13464188 ~ 13464259 (-) True trnav-gac
unassigned_transcript_1246 other downstream 1055 13463630 ~ 13463701 (-) True trnaa-cgc_47
unassigned_transcript_1245 other downstream 1237 13463448 ~ 13463519 (-) True trnaa-cgc_46
unassigned_transcript_1244 other downstream 1542 13463143 ~ 13463214 (-) True trnaa-ugc_107
unassigned_transcript_1250 other upstream 234 13465061 ~ 13465132 (-) True trnaa-cgc_49
unassigned_transcript_1251 other upstream 416 13465243 ~ 13465314 (-) True trnaa-cgc_50
unassigned_transcript_1252 other upstream 598 13465425 ~ 13465496 (-) True trnaa-ugc_109
unassigned_transcript_1253 other upstream 779 13465606 ~ 13465677 (-) True trnaa-ugc_110
unassigned_transcript_1254 other upstream 925 13465752 ~ 13465823 (-) True trnaa-ugc_111