RNA id: unassigned_transcript_1258



Basic Information


Item Value
RNA id unassigned_transcript_1258
length 72
RNA type tRNA
GC content 0.56
exon number 1
gene id trnaa-cgc_52
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13466455 ~ 13466526 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 108934 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 111672 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 112275 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 112805 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 113386 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 70418 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 226812 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 230973 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 251676 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 357146 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 49968 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 60559 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 5370 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 23424 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 29609 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 29609 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 29609 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1257 other downstream 77 13466307 ~ 13466378 (-) True trnaa-ugc_113
unassigned_transcript_1256 other downstream 258 13466126 ~ 13466197 (-) True trnaa-ugc_112
unassigned_transcript_1255 other downstream 440 13465944 ~ 13466015 (-) True trnaa-cgc_51
unassigned_transcript_1254 other downstream 632 13465752 ~ 13465823 (-) True trnaa-ugc_111
unassigned_transcript_1253 other downstream 778 13465606 ~ 13465677 (-) True trnaa-ugc_110
unassigned_transcript_1259 other upstream 268 13466794 ~ 13466865 (-) True trnaa-cgc_53
unassigned_transcript_1260 other upstream 460 13466986 ~ 13467057 (-) True trnaa-cgc_54
unassigned_transcript_1261 other upstream 629 13467155 ~ 13467226 (-) True trnaa-ugc_114
unassigned_transcript_1262 other upstream 968 13467494 ~ 13467565 (-) True trnaa-ugc_115
unassigned_transcript_1263 other upstream 1342 13467868 ~ 13467939 (-) True trnaa-cgc_55