RNA id: unassigned_transcript_1261



Basic Information


Item Value
RNA id unassigned_transcript_1261
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnaa-ugc_114
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13467155 ~ 13467226 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcatctcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66532 lncRNA downstream 109634 13356987 ~ 13357521 (-) True G44942
TU66531 lncRNA downstream 112372 13354307 ~ 13354783 (-) True G44941
TU66530 lncRNA downstream 112975 13353915 ~ 13354180 (-) True G44940
TU66529 lncRNA downstream 113505 13353364 ~ 13353650 (-) True G44939
TU66528 lncRNA downstream 114086 13352462 ~ 13353069 (-) True G44938
TU66619 lncRNA upstream 69718 13536944 ~ 13611593 (-) True G45014
TU66648 lncRNA upstream 226112 13693338 ~ 13694164 (-) True G45036
TU66652 lncRNA upstream 230273 13697499 ~ 13697711 (-) True G45039
TU66661 lncRNA upstream 250976 13718202 ~ 13722531 (-) False pex5la
XR_006251212.1 lncRNA upstream 356446 13823672 ~ 13835591 (-) False LOC122347350
XM_043242215.1 mRNA downstream 50668 13407566 ~ 13416487 (-) True tomm70a
XM_043241138.1 mRNA downstream 61259 13390703 ~ 13405896 (-) False tbc1d23
XM_043242546.1 mRNA upstream 4670 13471896 ~ 13478911 (-) True glmnb
XM_043242777.1 mRNA upstream 22724 13489950 ~ 13495596 (-) True gfi1ab
XM_043242771.1 mRNA upstream 28909 13496135 ~ 13535440 (-) False evi5b
XM_043242768.1 mRNA upstream 28909 13496135 ~ 13535440 (-) False evi5b
XM_043242769.1 mRNA upstream 28909 13496135 ~ 13534741 (-) True evi5b
unassigned_transcript_1260 other downstream 98 13466986 ~ 13467057 (-) True trnaa-cgc_54
unassigned_transcript_1259 other downstream 290 13466794 ~ 13466865 (-) True trnaa-cgc_53
unassigned_transcript_1258 other downstream 629 13466455 ~ 13466526 (-) True trnaa-cgc_52
unassigned_transcript_1257 other downstream 777 13466307 ~ 13466378 (-) True trnaa-ugc_113
unassigned_transcript_1256 other downstream 958 13466126 ~ 13466197 (-) True trnaa-ugc_112
unassigned_transcript_1262 other upstream 268 13467494 ~ 13467565 (-) True trnaa-ugc_115
unassigned_transcript_1263 other upstream 642 13467868 ~ 13467939 (-) True trnaa-cgc_55
TU66636 other upstream 201302 13668528 ~ 13681274 (-) False tmem131
TU66983 other upstream 693249 14160475 ~ 14193166 (-) True G45257
TU67455 other upstream 1861741 15328967 ~ 15330817 (-) False LOC122347580