RNA id: XM_043245243.1


Basic Information

Item Value
RNA id XM_043245243.1
length 1715
RNA type mRNA
GC content 0.44
exon number 8
gene id si:ch211-216p19.6
representative True

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 1049849 ~ 1055176 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGAAAAGGTGACAATATACACTCTCCTTCCTCCTGCATTACACCGCAGTTGCACTGAGAACCTACAAGAAACCACACGTACCTAGAGCGATGGCTTCTTCCATCAGTTCCCAGGTTGAACAGTTCCTGTGTTCAATATGTCAGGACGTCTTCTCTGAACCGGTAACTATTCCGTGTGGACACAACTTCTGCATGGTATGCATCACTCAACACTGGGACAGCAGTATGGGCACGAAATGTCCCCTTTGCAAGACGAACTTTCACTTGAGACCAGAGCTTGGCATCAACAGAGAATTCAGAGAGCTCATCAAAAGACCGAAGAGGGGAGAAAGTCCTTTTCAAGCTGGTGCAGTACCATGTGATGCgtgtacaaaaataaagagagaagcTTTGAAGTCTTGCCTGCATTGTGAAGGATCTTTCTGTAAAACTCATCTAGAGCCTCATAACACTGTAGCAAAACTGAAGAAACACAAACTTATCAACCCTGTGGACAATCTGGAAGATTATATATGCCCGAAGCATGAGAGGCCGCTGGAGCTTTTCTGCAGAGATGATCAGAAGTGTGTGTGCCTGTCGTGTATAACGAAAGATCACAAAACCCACAAGACTGTTCCTGTAGAGGAAGAGGGTGAAAAACGGAAGTCTCAGTTTGGAAAACAAGCTGAGGTTAATTTGATGATTCAGAGCAGAATGAAGAAAATTGAAGATATCAAATGCTCAGTACAGCTCAGCAAGCAAAgctcagaaaaagaaaaagcagacatTGTTGAGCTGTTCAATGATCTGATGGATTCAATTGAGAGATGTCAGTCTGAGCTACTGGAGGTAATGGAGCAGAAGCAGAAAGCAGCAGAAACACAGGCTGAAGATCTGATTAAAGAGCTTACGCAGGAAATTACTGAGCTGAAGAGGAGAGACGCTGAGCTGGAGCAGCTCTCACACACTGAAGATCACCTGCACCTCCTACAGGTTTATCCATCCCTGTGCAGGCCTTTAGGCACCAAGATTTGGGCTGGGATCAGTACTGACACTCATCTGGAGGAGGACGCTGTGCGGAGAGCCCTGACAAAGCATCAAGAATTCCTTAACTGTGTAATAGTGAAGGTTACAGAAACCGagcTACAGAGGATTGAAAAGTTTACAGTGAATGTGACTATGGATCCTGAAACGGCTCATCCTAAACTCTTCTTGTCTGAGGATGACAAACAAGTTGGATATGGAGAAACACGACAGATTGTCCCGGATAATCCATGTAGGTTTGATACATGTCCCAGCATCCTCGGGAAGGAGGGATTCTCCTCTGGgaaattttattttgaggtgCAGGTGAAAGGGAAAACTGAGTGGGATGTAGGTGTGGCGAGAGAGTCTGTTAACAGGAAGGGAATCATTACTCTCAGTCCAAGAAATGGACTCTGGACTCTGTGGTTGAGAAATGGAAGTGAGTATAAGGCCTGtgattgtctgtctgtctctctgtgtctgaaAATCAAGCCCCAGAAGGTGGGTGTGTATGTAGATTATGAGGAAGGTCTGGTCTCATTTTATGATGTGGAGTCCAGGTGTCACATCTACTCTTTCACTGGTCAGGCTTTCACAGAGAAACTCTATCCATATTTCAGCCCAGGCTTTACTCATGGTGATAAGAATTCATCTCCACTGATCATTTTACCTgtctgtaattaaaataaaataaataaatcaatgaagaAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU72568 lncRNA downstream 53350 996084 ~ 996499 (-) True G49011
TU72560 lncRNA downstream 67087 982339 ~ 982762 (-) True G49004
TU72533 lncRNA downstream 102687 946464 ~ 947162 (-) True G48985
TU72458 lncRNA downstream 145949 899143 ~ 903900 (-) True G48936
TU72435 lncRNA downstream 227411 819637 ~ 822438 (-) False LOC122348397
TU72588 lncRNA upstream 23787 1078963 ~ 1079192 (-) True G49023
TU72772 lncRNA upstream 114805 1169981 ~ 1220893 (-) True G49133
TU72875 lncRNA upstream 410013 1465189 ~ 1468013 (-) True G49186
TU72908 lncRNA upstream 442147 1497323 ~ 1517408 (-) True G49210
TU72935 lncRNA upstream 551695 1606871 ~ 1607083 (-) True G49231
XM_043244833.1 mRNA downstream 3532 1040922 ~ 1046317 (-) False zgc:153151
XM_043244832.1 mRNA downstream 3532 1040922 ~ 1046317 (-) False zgc:153151
XM_043244831.1 mRNA downstream 3532 1040922 ~ 1046317 (-) False zgc:153151
XM_043244829.1 mRNA downstream 3532 1040922 ~ 1046317 (-) True zgc:153151
XM_043244834.1 mRNA downstream 3532 1042008 ~ 1046317 (-) False zgc:153151
XM_043245245.1 mRNA upstream 407 1055583 ~ 1060389 (-) True gmpr2
XM_043245244.1 mRNA upstream 7340 1062516 ~ 1078835 (-) True slc7a8a
XM_043243869.1 mRNA upstream 88003 1143179 ~ 1146326 (-) True txn
XM_043243870.1 mRNA upstream 92309 1147485 ~ 1151598 (-) True ptgr1.2
XM_043243874.1 mRNA upstream 96748 1151924 ~ 1155410 (-) False ptgr1.1
XR_006251388.1 other downstream 3532 1042008 ~ 1046317 (-) False zgc:153151
TU72452 other downstream 166038 880602 ~ 883811 (-) False zgc:162171
unassigned_transcript_1267 other downstream 768994 280782 ~ 280855 (-) True trnan-guu_33
TU72302 other downstream 775351 270369 ~ 274498 (-) True G48823
TU72258 other downstream 836191 211341 ~ 213658 (-) False si:dkey-112a7.4
TU72774 other upstream 114805 1169981 ~ 1220893 (-) False G49133
TU72777 other upstream 114805 1169981 ~ 1220893 (-) False G49133
TU73047 other upstream 842907 1898083 ~ 1898826 (-) True G49309
TU73048 other upstream 846886 1902062 ~ 1904331 (-) False LOC122348471
TU73049 other upstream 846886 1902062 ~ 1904143 (-) False LOC122348471

Expression Profile