RNA id: XM_043245244.1


Basic Information

Item Value
RNA id XM_043245244.1
length 4674
RNA type mRNA
GC content 0.41
exon number 11
gene id slc7a8a
representative True

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 1062516 ~ 1078835 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGGAGGGGGGTTGACATAAGGAATAAGCTACAGAAGAGGAGCTTGGAGCGCTTGTGCTTTATTGCTGGACACGCGAACTGTTCTCGGCGCGCGGACACTAAACTGCCCAAAGGCGTTTGGCAGGAGTTCTTAGCCAAAACGATTGTCTTAAGAACGAGGAAGCACCAGATATTTACAGGAAGGAGGACACATTTGTGAACAGGTTTGGTAGCGTGGGGTTTTGGTTTAAACTGCAAATTAAAACCTGGACAACCTTAACAACAAACGGACGCGTAAAAGTTGCGACTGGAACattactgtagtttttttttttaatacgttCGAAATTAGTGCCGTATATGGAGTTTTAACGCACGGGAAGGAAGTATTCTGTAGCATCGACAGTGCCTTATTTCGGTTGTGCTGAATAGGCTTGCCGCACACCTTACTCTGCCGCTATCGTTACACATAATATTTACTGACACATGCTTCAGAGCAGCCTCGCGTTGATAAGAAGGGAAAGATAAAGGTCGCGTAGCGTAGCGCGAGATAGTATACGGGCTGTTTATGTATACATTAGAGTCGCTTTCTGAGATCTGACCGGCGGTACGCGGCTCTAGCATCACCGCTCAATAGCGAGGACCGAATATCTCAATTAGCAACATGACGGATGGACCGAGACAAAGAGGCAGCGCAGCCCCGAGCACCAGCGAGGATGCAGCCGCAGACACAGGGAATGCCGCAGGACAGTCATCGGTGGCGCTGAAGAAGGAGATCGGTCTCGTCAGTGCTTGTGGCATTATTGTCGgtAATATTATTGGCTCTGGAATCTTTGTCAGCCCAAAGGGAGTGTTGGAAAATGCCAGTTCAGTGGGACTGGCCCTCATCGTATGGATCATCACAGGTGTTATAACAGCGATCGGCGCACTCTGCTATGCTGAGCTGGGTGTTACTATCCCCAAATCTGGAGGCGACTACTCTTATGTCAAGGACATCTTCGGAGGGCTGGCAGGGTTTCTGCGGTTGTGGATTGCTGTGCTGGTGATCTACCCTACTAACCAGGCGGTTATTGCTCTCACCTTCTCCAACTATGTCCTGCAGCCTCTGTTCCCCACCTGCTTCCCCCCAGAGAATGGTCTGCGCCTGCTTGCTGCCATCTGCTTGTTGCTGCTGACTTGGGTGAATTGTGCTAGCGTGCGCTGGGCAACACGAGTACAGGATGTCTTCACTGCAGGGAAACTTCTGGCCCTCATTCTTATCATCATCATGGGCATCGTACAAATTTGCAAGGGCGAGTACTACTGGTTGGAACCAGCTAATGCTTTCGAGCCGTTTCAAGACTACGATATTGGTCTGATCGCTCTAGCATTTCTACAGGGGTCCTTTGCCTACGGTGGCTGGAATTTCCTCAATTATGTCACAGAGGAACTCGTTGACCCCTATGTGAACCTTCCCCGTGCTATCTTCATCTCCATTCCCCTTGTGACCTTCGTGTATGTTTTTGCTAACATTGCTTACGTCACTGCCATGAGCCCTCAGGAACTGCTGGCTTCTAATGCTGTAGCTGTGACGTTTGGTGAAAAGCTGTTGGGAGTGATGTCATGGATCATGCCCATCTCTGTGGCCTTGTCCACATTTGGGGGGGTCAACGGCTCCCTCTTCACCTCCTCTCGGTTGTTCTTTGCGGGTGCACGTGAAGGTCATCTTCCTAGCTTACTGGCTATGATTCATGTAAAGCGCTGCACACCAATTCCAGCCCTGCTCTTTACTTGCCTCTCTACACTTCTAATGCTGTGCACCAGTGACATGTACACACTCATCAACTATGTGGGTTTCATCAACTACCTCTTCTACGGTGTCACTGTTGCTGGGCAGATTGTTCTGAGGATTAAACAACCAGATATACACCGGCCAATTAAAATCAGTCTGGTGTGGCCTGTCATCTACCTGCTGTTTTGGGCCTTCCTATTGATCTTCTCTCTGTACTCGGAGCCTGTGGTGTGTGGCATTGGCTTGGCCATCATGCTTACTGGAGTCCCAGTCTATTTCTTGGGCGTGTACTGGGACAACAAACCACAGTGTTTCAATACATTTGTTGacaAGATGACATACCTGGGTCAAAAGTTTTGTGTAGTAGTCTACCCGATGGAGGACGAGAAGAAAAACGAGGAGTCTGTAGAAGAGATCGAACTCAAGGAACAGTCGGTTCCGCTGTCAGCTGAGGATGAGCAGACACCGAAGTCAGCTGACTGCTGAACAGGCACATGAAGACATACTTATTCACTCACATACGGGCAGCCAGGTTTATTCAGATAGACACTGGAAATCAAACTAATTTTTCACATACCTCTGTATTATGCCTTTTCATAAAGAGGGGGTTGCACTGGAGTGCGGTGGCTAAGCTCAGGAGACTAATGAACAGAGAATAGCTGCTCCACTGGTCATGTGGTTGTGCTGTAGTGGTCTTAAACAATGTTCTCCGTTCTCTCTAGTTGCTAGTCTCTTAGCAACTGCTTTCTACTCCACTGGATGTGCGACAGaattacaacattaaaatgtgGAATGACATAAATCTCTAGAATGTATTACTTACAAACACTGGTTTAGAAGggtctgcatttttaaaaaagacctttctgaaacattcttttttccttttcaattaTGCAAAAATTGCCTAAATACATCACGGCTTCACCTGAAATGGTGGCAGGgttcgttttatttatttatttattactgagTACATTCTAATGTTCTAATTCTTACCCcctctttatttttcctttttaagttATCTCCTaacactaaatgtttttttataagccaaagctgtattttaatttgacattttctcATTTCAAGAGTTTTTCATCACACCAAAACACTCAGaaccatttctttttatatattttgatgttttcattgtcatttcATTGTTCAAATCAcattcatttctcattttgaaatcattgttcttttacatttgattttctctgttctctttccTGAAGGAAAGCtctgggatgtttttttttatcatcatattttttaagGCATATATATAAGAACCAATTGTGGTGGTTCAGAGTAGATTTCTACCAGGTTACTCTGGTATTGATACAATTTAAGCTCTTTTATTTGCCTTAAAACTATACATAAACTGTATAAAGTTATTATCACTGTTGAAGAGTATTTttctttctgatatttttgaagATAAAAAGTGTTCAGTGAAAACTTAAAGAGGCCgttgtgaaattaaatgttgcAATGGTATCTTTATTCTGTGTGGACTTTACACAGAGAATATGGCTCCTACCGCTATCTATCTGCTTTATAGCCACAGTCATAACCCACATGTTcactttcatgcagtttcattatttcacaagtatatacacaaatatattcaaaattgcAGAGTGTTTGGTaatatatggcaaaaaaaagaaaagaaaaacagtagtGATGCATAGATAGTGTCTGTGATGTAACTGAAAGCCTGTGAGAATGTAATAGTTCATTTATTATGTGAATATTCAAAAACTTGAAATCAATTATGTCAGTGGAGCTCGTTAAATCAGTCTTATAATGCACAACATATTATAATTGTGTAGAGGGACTGTAGAAGTTAATCTAGGTGCAATACAAGGGATTAGAAAAAATCGATCAAGATAACCAGCATAGTTTGGATGATTACATTAATAtactaaataattgaaatacacACCTAAATGGAGAGCcttaaaaagaattaattttCTAACAAAATTACTTAAAGTATATTCgtgtaagtaaataataatatcctCAGTTCAAGAATACATGATTAAAGTGTTCAGTATGTATGTCACTTGTCCATACAAGCGTGTAAGGCTTTTTAGTGATCACAGGGTCTTTTTATTGTGCCTCTGTATTGATGTCACACCTTTACCTGCTTGTGAAGACTATGGAAAGTGCCGattgttaattgttttattattattttttgctgatCTGTAGTGTGTAGGTGCTGtataaaaagcagttttattagTGTAATTCATTGCACATCCATTTTGCATGAGCTTAATCCCCACACCACCTACTATAATATCACATTGATAACCTTCGTATTTACACAAGAAACACTGCCTTTTGGTTCCTCTGTCCTAGTCAGGCGACGAAGAGGCCTGTTATCATTCATTTTTCAACTGACTGTATAAACTTTTAATCATTACGTGTATCATCAAAGGTGCAGAGCATCTTTGGCTGTAGTAATGCTGCTCCTGAGCTGTGCCTCAGTATCCAGCACTGCCTACTGTGTGCTAAACACAAAcactatgtatattttatataggaGCTGCACTTCTGATTGTGCTGCAGTATTTGGCTTtcttatccacacacacacacacacacacactatcataCAGATGACACCAAAAGCCATGCAAAATGAATTCCATGACATATTTGATCATTAGTAACAAATGATTGATGTTAATGTTTTGAATGTCCTCACAATTACATGAACAACATAATGATTTTTCTAgattatatgtacaatttaaaagGATAAACTCAAATTACCACTTACACATAACTGAGGGTGAACGGTTTGTACCAGAGTCTACTTGTTTActatatgttttgtatttgtttgaacagtatatattaaaaacaaataaatctgtATGCTGAACCAGGAAA

Function

GO: NA

KEGG:

id description
K13781 SLC7A8, LAT2; solute carrier family 7 (L-type amino acid transporter), member 8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU72568 lncRNA downstream 66017 996084 ~ 996499 (-) True G49011
TU72560 lncRNA downstream 79754 982339 ~ 982762 (-) True G49004
TU72533 lncRNA downstream 115354 946464 ~ 947162 (-) True G48985
TU72458 lncRNA downstream 158616 899143 ~ 903900 (-) True G48936
TU72435 lncRNA downstream 240078 819637 ~ 822438 (-) False LOC122348397
TU72588 lncRNA upstream 128 1078963 ~ 1079192 (-) True G49023
TU72772 lncRNA upstream 91146 1169981 ~ 1220893 (-) True G49133
TU72875 lncRNA upstream 386354 1465189 ~ 1468013 (-) True G49186
TU72908 lncRNA upstream 418488 1497323 ~ 1517408 (-) True G49210
TU72935 lncRNA upstream 528036 1606871 ~ 1607083 (-) True G49231
XM_043245245.1 mRNA downstream 2127 1055583 ~ 1060389 (-) True gmpr2
XM_043245243.1 mRNA downstream 7340 1049849 ~ 1055176 (-) True si:ch211-216p19.6
XM_043244831.1 mRNA downstream 16199 1040922 ~ 1046317 (-) False zgc:153151
XM_043243869.1 mRNA upstream 64344 1143179 ~ 1146326 (-) True txn
XM_043243870.1 mRNA upstream 68650 1147485 ~ 1151598 (-) True ptgr1.2
XM_043243874.1 mRNA upstream 73089 1151924 ~ 1155410 (-) False ptgr1.1
XM_043243873.1 mRNA upstream 73089 1151924 ~ 1155410 (-) True ptgr1.1
XM_043243875.1 mRNA upstream 123560 1202395 ~ 1212213 (-) True nat8l
XR_006251388.1 other downstream 16199 1042008 ~ 1046317 (-) False zgc:153151
TU72452 other downstream 178705 880602 ~ 883811 (-) False zgc:162171
unassigned_transcript_1267 other downstream 781661 280782 ~ 280855 (-) True trnan-guu_33
TU72302 other downstream 788018 270369 ~ 274498 (-) True G48823
TU72259 other downstream 848858 211341 ~ 213658 (-) False si:dkey-112a7.4
TU72774 other upstream 91146 1169981 ~ 1220893 (-) False G49133
TU72777 other upstream 91146 1169981 ~ 1220893 (-) False G49133
TU73047 other upstream 819248 1898083 ~ 1898826 (-) True G49309
TU73048 other upstream 823227 1902062 ~ 1904331 (-) False LOC122348471
TU73049 other upstream 823227 1902062 ~ 1904143 (-) False LOC122348471

Expression Profile