RNA id: XR_006251485.1


Basic Information

Item Value
RNA id XR_006251485.1
length 241
lncRNA type inter_gene
GC content 0.51
exon number 3
gene id LOC122349723
representative True

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 1457 ~ 1864 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GACCCCAGCAAGTTTCAGGACAGCTGGAGACTATCTGATGGGTTTGTAGCTGCAGAAGCCAAAGTCATATTGCCTCACAGAGCACGATCCAGACCAGACCTCATGGACAACTACCTGGCACTACTGCTGTCTGCCTTTATCAATAGTGGACTGCTGGAGGGTCTGGTGGAGGTAGTGACCAGCAGTGATGGACAGATATCAGTGAGGGCCACTATACTGCTTGGAGAACTTCTGCACATGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251465.1 lncRNA upstream 127 1991 ~ 4067 (-) True LOC122349555
TU72136 lncRNA upstream 54541 56405 ~ 64136 (-) True G48720
TU72155 lncRNA upstream 85686 87550 ~ 89420 (-) True G48733
TU72154 lncRNA upstream 85787 87651 ~ 89420 (-) False G48733
TU72159 lncRNA upstream 119155 121019 ~ 121395 (-) True G48736
XM_043244591.1 mRNA upstream 6399 8263 ~ 15074 (-) True LOC122348751
XM_043244840.1 mRNA upstream 209477 211341 ~ 213685 (-) False si:dkey-112a7.4
XM_043244838.1 mRNA upstream 209477 211341 ~ 213683 (-) True si:dkey-112a7.4
XM_043245958.1 mRNA upstream 281469 283333 ~ 285000 (-) True tifa
XM_043244534.1 mRNA upstream 337961 339825 ~ 358332 (-) True tnfsf10l
XR_006251529.1 other upstream 21740 23604 ~ 23703 (-) True LOC122349836
TU72258 other upstream 209477 211341 ~ 213658 (-) False si:dkey-112a7.4
TU72259 other upstream 209477 211341 ~ 213658 (-) False si:dkey-112a7.4
TU72302 other upstream 268505 270369 ~ 274498 (-) True G48823
unassigned_transcript_1267 other upstream 278918 280782 ~ 280855 (-) True trnan-guu_33