RNA id: XR_006251529.1


Basic Information

Item Value
RNA id XR_006251529.1
length 100
RNA type snoRNA
GC content 0.47
exon number 1
gene id LOC122349836
representative True

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 23604 ~ 23703 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTCCAGTGATGAGCCAGCCATGCTAATACTGATGCACCAGGCTGTCTGGGTGTAAGTGAGTTAACTTATCTTCTCACACTTGCAGTGTGCTCTGAGGAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251465.1 lncRNA downstream 19537 1991 ~ 4067 (-) True LOC122349555
XR_006251485.1 lncRNA downstream 21740 1457 ~ 1864 (-) True LOC122349723
TU72136 lncRNA upstream 32702 56405 ~ 64136 (-) True G48720
TU72155 lncRNA upstream 63847 87550 ~ 89420 (-) True G48733
TU72154 lncRNA upstream 63948 87651 ~ 89420 (-) False G48733
TU72159 lncRNA upstream 97316 121019 ~ 121395 (-) True G48736
TU72164 lncRNA upstream 146296 169999 ~ 170927 (-) True G48741
XM_043244591.1 mRNA downstream 8530 8263 ~ 15074 (-) True LOC122348751
XM_043244840.1 mRNA upstream 187638 211341 ~ 213685 (-) False si:dkey-112a7.4
XM_043244838.1 mRNA upstream 187638 211341 ~ 213683 (-) True si:dkey-112a7.4
XM_043245958.1 mRNA upstream 259630 283333 ~ 285000 (-) True tifa
XM_043244534.1 mRNA upstream 316122 339825 ~ 358332 (-) True tnfsf10l
XM_043245930.1 mRNA upstream 338320 362023 ~ 367395 (-) False si:dkey-171c9.3
TU72258 other upstream 187638 211341 ~ 213658 (-) False si:dkey-112a7.4
TU72259 other upstream 187638 211341 ~ 213658 (-) False si:dkey-112a7.4
TU72302 other upstream 246666 270369 ~ 274498 (-) True G48823
unassigned_transcript_1267 other upstream 257079 280782 ~ 280855 (-) True trnan-guu_33
TU72452 other upstream 856899 880602 ~ 883811 (-) False zgc:162171