RNA id: unassigned_transcript_1267



Basic Information


Item Value
RNA id unassigned_transcript_1267
length 74
RNA type tRNA
GC content 0.61
exon number 1
gene id trnan-guu_33
representative True

Chromosome Information


Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 280782 ~ 280855 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCTCTGTGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU72304 lncRNA downstream 433 279484 ~ 280349 (-) True G48824
TU72281 lncRNA downstream 23997 256547 ~ 256785 (-) True G48808
TU72275 lncRNA downstream 39235 239294 ~ 241547 (-) True G48802
TU72238 lncRNA downstream 42605 236640 ~ 238177 (-) False G48781
TU72239 lncRNA downstream 42605 236640 ~ 238177 (-) True G48781
TU72292 lncRNA upstream 6400 287255 ~ 308325 (-) False G48817
TU72290 lncRNA upstream 11000 291855 ~ 294469 (-) True G48816
TU72293 lncRNA upstream 19390 300245 ~ 306365 (-) False G48817
TU72294 lncRNA upstream 25566 306421 ~ 308325 (-) True G48817
TU72309 lncRNA upstream 28189 309044 ~ 336585 (-) True G48825
XM_043244840.1 mRNA downstream 67097 211341 ~ 213685 (-) False si:dkey-112a7.4
XM_043244838.1 mRNA downstream 67099 211341 ~ 213683 (-) True si:dkey-112a7.4
XM_043244591.1 mRNA downstream 265708 8263 ~ 15074 (-) True LOC122348751
XM_043245958.1 mRNA upstream 2478 283333 ~ 285000 (-) True tifa
XM_043244534.1 mRNA upstream 58970 339825 ~ 358332 (-) True tnfsf10l
XM_043245930.1 mRNA upstream 81168 362023 ~ 367395 (-) False si:dkey-171c9.3
XM_043245927.1 mRNA upstream 81168 362023 ~ 367395 (-) True si:dkey-171c9.3
XM_043245928.1 mRNA upstream 81168 362023 ~ 367372 (-) False si:dkey-171c9.3
TU72302 other downstream 6284 270369 ~ 274498 (-) True G48823
TU72258 other downstream 67124 211341 ~ 213658 (-) False si:dkey-112a7.4
TU72259 other downstream 67124 211341 ~ 213658 (-) False si:dkey-112a7.4
XR_006251529.1 other downstream 257079 23604 ~ 23703 (-) True LOC122349836
TU72452 other upstream 599747 880602 ~ 883811 (-) False zgc:162171
XR_006251388.1 other upstream 761153 1042008 ~ 1046317 (-) False zgc:153151
TU72774 other upstream 889126 1169981 ~ 1220893 (-) False G49133
TU72777 other upstream 889126 1169981 ~ 1220893 (-) False G49133
TU73047 other upstream 1617228 1898083 ~ 1898826 (-) True G49309