RNA id: TU89018



Basic Information


Item Value
RNA id TU89018
length 304
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G60188
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1279000 ~ 1279303 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ctctcattagagttactaatgacctgcttctatcatctgatcgtggttttatctcgttattagtgctattagatcttagcgcagcattcaatactatcgatcacaacattctcttggatagactagaaaactatgttggcattagaggaagcgccttagcatggtttaaatcatatctatctgaccgctatcagtttgtggcattaaatgaggaggtatcatatcgatcaaaagtgaaatatggagttcctcaaggctcagtgctaggaccgttacttttcaacctgtacatgttacctctggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89017 lncRNA downstream 9616 1268798 ~ 1269384 (-) True G60187
TU88997 lncRNA downstream 12191 1232076 ~ 1266809 (-) True G60169
TU88994 lncRNA downstream 12768 1264599 ~ 1266232 (-) True G60166
TU88999 lncRNA downstream 60198 1214307 ~ 1218802 (-) True G60170
TU88974 lncRNA downstream 94351 1184308 ~ 1184649 (-) True G60154
TU89019 lncRNA upstream 32582 1311885 ~ 1312144 (-) True G60189
TU89024 lncRNA upstream 72664 1351967 ~ 1449930 (-) True G60192
TU89026 lncRNA upstream 105116 1384419 ~ 1474712 (-) True G60194
TU89034 lncRNA upstream 120425 1399728 ~ 1493160 (-) False G60198
TU89032 lncRNA upstream 122186 1401489 ~ 1493160 (-) False G60198
XM_043247081.1 mRNA downstream 26484 1250060 ~ 1252516 (-) False pym1
XM_043247080.1 mRNA downstream 26484 1250060 ~ 1252516 (-) True pym1
XM_043246297.1 mRNA downstream 30636 1244834 ~ 1248364 (-) False LOC122350094
XM_043246612.1 mRNA upstream 69868 1349171 ~ 1356953 (-) True LOC122350266
XM_043246610.1 mRNA upstream 167697 1447000 ~ 1454530 (-) True LOC122350264
XM_043247249.1 mRNA upstream 215202 1494505 ~ 1523464 (-) True dtx1
XM_043247339.1 mRNA upstream 282243 1561546 ~ 1606609 (-) True LOC122350657
XM_043247340.1 mRNA upstream 348350 1627653 ~ 1646362 (-) True LOC122350659
XR_006251689.1 other downstream 119754 1140698 ~ 1159246 (-) True commd10
TU88902 other downstream 140848 1135401 ~ 1138152 (-) True G60098
TU88852 other downstream 547380 727189 ~ 731620 (-) False LOC122349987
TU88755 other downstream 708027 565886 ~ 570973 (-) True ccl27a
TU89022 other upstream 72607 1351910 ~ 1356931 (-) False LOC122350266
TU89089 other upstream 297502 1576805 ~ 1578744 (-) True G60220
TU89090 other upstream 297502 1576805 ~ 1580616 (-) False G60220
TU89094 other upstream 322218 1601521 ~ 1605113 (-) False LOC122350657
TU89063 other upstream 453561 1732864 ~ 1787053 (-) False pi4kab

Expression Profile