RNA id: TU89026



Basic Information


Item Value
RNA id TU89026
length 259
lncRNA type sense_over
GC content 0.31
exon number 2
gene id G60194
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1384419 ~ 1474712 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTGCAggtatctgcacctcagtattgtaGCACATTAGAAAACGGTACGCAATAATCACTTGTTGAgtgtaaattgtaattttaatttcagttattaAATGGTTGCCTCCTTATTcggacaataaagccctccctaaACGattttcaactttttcgATTATTTCCTtcgtttttattgaaaatgcatgctttttttgatgttatttatgtatttcctATAGTAACGGGCCAtgttaaaaatctaaacaaaacaataaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89019 lncRNA downstream 72275 1311885 ~ 1312144 (-) True G60189
TU89018 lncRNA downstream 105116 1279000 ~ 1279303 (-) True G60188
TU89017 lncRNA downstream 115035 1268798 ~ 1269384 (-) True G60187
TU88997 lncRNA downstream 117610 1232076 ~ 1266809 (-) True G60169
TU89031 lncRNA upstream 13542 1488254 ~ 1493160 (-) True G60198
TU89035 lncRNA upstream 13542 1488254 ~ 1493160 (-) False G60198
TU89086 lncRNA upstream 67734 1542446 ~ 1544129 (-) True G60217
XR_006251559.1 lncRNA upstream 176208 1650920 ~ 1655010 (-) True LOC122350073
XR_006251560.1 lncRNA upstream 183026 1657738 ~ 1659992 (-) True LOC122350074
XM_043246612.1 mRNA downstream 27466 1349171 ~ 1356953 (-) True LOC122350266
XM_043247081.1 mRNA downstream 131903 1250060 ~ 1252516 (-) False pym1
XM_043247080.1 mRNA downstream 131903 1250060 ~ 1252516 (-) True pym1
XM_043246297.1 mRNA downstream 136055 1244834 ~ 1248364 (-) False LOC122350094
XM_043247249.1 mRNA upstream 19793 1494505 ~ 1523464 (-) True dtx1
XM_043247339.1 mRNA upstream 86834 1561546 ~ 1606609 (-) True LOC122350657
XM_043247340.1 mRNA upstream 152941 1627653 ~ 1646362 (-) True LOC122350659
XM_043246173.1 mRNA upstream 235646 1710358 ~ 1714221 (-) True LOC122349997
XM_043246174.1 mRNA upstream 235648 1710360 ~ 1714216 (-) False LOC122349997
TU89022 other downstream 27488 1351910 ~ 1356931 (-) False LOC122350266
XR_006251689.1 other downstream 225173 1140698 ~ 1159246 (-) True commd10
TU88902 other downstream 246267 1135401 ~ 1138152 (-) True G60098
TU88852 other downstream 652799 727189 ~ 731620 (-) False LOC122349987
TU88755 other downstream 813446 565886 ~ 570973 (-) True ccl27a
TU89089 other upstream 102093 1576805 ~ 1578744 (-) True G60220
TU89090 other upstream 102093 1576805 ~ 1580616 (-) False G60220
TU89094 other upstream 126809 1601521 ~ 1605113 (-) False LOC122350657
TU89063 other upstream 258152 1732864 ~ 1787053 (-) False pi4kab
TU89103 other upstream 274435 1749147 ~ 1753916 (-) True LOC122349998

Expression Profile