RNA id: TU89094



Basic Information


Item Value
RNA id TU89094
length 847
RNA type TUCP
GC content 0.33
exon number 3
gene id LOC122350657
representative False

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1561546 ~ 1606609 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGCTTCCAGGTGATGTTCAGATACTTTGAGGACAAGGCCATCCAGAAAGACAAATCAGGCATGATGCAGTGCGTGATTTGTGTAGGTGACAAAGTCTTTGAGGTTTTCCTGCAGATGATGGCTGAGAAACCCAAGACTAAAGAGCATGAGGAGGAGCTGGAGCGCCACGCTCAGTTCCTATTGGTCAACTTTAACCACACCCACAAGAGGATCCGACGGGTGGCAGATAAATACCTCTCAGGACTCGCCGAAACGTACCACAATCCACACTTTCAATAGAAGGCTTATTAATAAGCATCACTTATGATAACCTGAACAATTTCGCGCAGTATTTATAGATTCCTTGTTCTTTTTGCGCTGTCTGTTTCTTATTAGAGTATAGAGTCGTACACGAAGACTAAAgggttttaaaaacacaaatgcagcaaaaatacatatgaatatgTTGCCAACAAATGATCTTTAGTGGAAACCTGCAGGGAGAGCTTAAAGTAAAAGCTCTGTGGTTTAGTGTTTGAAAGACAGCTGTTCtgtaaaataatgtcattttatttttatatattattattgctataaaatatttctttattgaaaatgtcatttcacaACATTATCATTTTACTaccaataatataattttaatctaTCATTTGTAGTATTATTACAGTAACACTATTGCTATAGTGAAGTATTTCTTTATAGgtttttttggtaatttaatGATGCaatgatgatgatttttttttaattaaattctataaaacttctataacatattttttgtaatccacttttattattattattattattattattattattattattattgctatcattgtac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89086 lncRNA downstream 57392 1542446 ~ 1544129 (-) True G60217
TU89043 lncRNA downstream 87226 1457970 ~ 1514295 (-) True G60199
TU89033 lncRNA downstream 108361 1401489 ~ 1493160 (-) False G60198
XR_006251559.1 lncRNA upstream 45807 1650920 ~ 1655010 (-) True LOC122350073
XR_006251560.1 lncRNA upstream 52625 1657738 ~ 1659992 (-) True LOC122350074
TU89078 lncRNA upstream 56376 1661489 ~ 1671766 (-) True G60209
XR_006251558.1 lncRNA upstream 59189 1664302 ~ 1666989 (-) True LOC122350072
TU89083 lncRNA upstream 68403 1673516 ~ 1684040 (-) True G60214
XM_043247249.1 mRNA downstream 78057 1494505 ~ 1523464 (-) True dtx1
XM_043246610.1 mRNA downstream 146991 1447000 ~ 1454530 (-) True LOC122350264
XM_043246612.1 mRNA downstream 244568 1349171 ~ 1356953 (-) True LOC122350266
XM_043247081.1 mRNA downstream 349005 1250060 ~ 1252516 (-) False pym1
XM_043247340.1 mRNA upstream 22540 1627653 ~ 1646362 (-) True LOC122350659
XM_043246173.1 mRNA upstream 105245 1710358 ~ 1714221 (-) True LOC122349997
XM_043246174.1 mRNA upstream 105247 1710360 ~ 1714216 (-) False LOC122349997
XM_043246175.1 mRNA upstream 143949 1749062 ~ 1762549 (-) False LOC122349998
XM_043247343.1 mRNA upstream 166869 1771982 ~ 1777474 (-) True LOC122350661
TU89090 other downstream 20905 1576805 ~ 1580616 (-) False G60220
TU89089 other downstream 22777 1576805 ~ 1578744 (-) True G60220
TU89022 other downstream 244590 1351910 ~ 1356931 (-) False LOC122350266
XR_006251689.1 other downstream 442275 1140698 ~ 1159246 (-) True commd10
TU88902 other downstream 463369 1135401 ~ 1138152 (-) True G60098
TU89063 other upstream 127751 1732864 ~ 1787053 (-) False pi4kab
TU89103 other upstream 144034 1749147 ~ 1753916 (-) True LOC122349998
TU89104 other upstream 144034 1749147 ~ 1755384 (-) False LOC122349998
TU89107 other upstream 144034 1749147 ~ 1751368 (-) False LOC122349998
TU89498 other upstream 454281 2059394 ~ 2061335 (-) False c8h22orf39

Expression Profile