RNA id: TU89547



Basic Information


Item Value
RNA id TU89547
length 228
lncRNA type inter_gene
GC content 0.25
exon number 2
gene id G60510
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2124058 ~ 2124341 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


aatattttttgttaaaaccgCGATGCATTCGATTTTTAGGACTCTTcaatttaatgcatcctcgttgaataaaagtcttaatttctttattattaatgttttataataattactgtggcttaaaaacatattttaaaaggcatttaaaaggcatttgaaTTCATGTTAAATTGAAATCATTGAATTAATATTTGAGCCTTCGAATGCAGATCTATATATAAACGCACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89490 lncRNA downstream 84233 2037700 ~ 2039825 (-) True G60487
TU89472 lncRNA downstream 129313 1991335 ~ 1994745 (-) True G60473
TU89471 lncRNA downstream 130960 1991335 ~ 1993098 (-) False G60473
TU89469 lncRNA downstream 135505 1987773 ~ 1988553 (-) True G60471
TU89115 lncRNA downstream 274125 1849488 ~ 1849933 (-) True G60237
TU89530 lncRNA upstream 7028 2131369 ~ 2156393 (-) False LOC122351111
TU89537 lncRNA upstream 7045 2131386 ~ 2135058 (-) False LOC122351111
TU89523 lncRNA upstream 7949 2132290 ~ 2134865 (-) False LOC122351111
TU89524 lncRNA upstream 7949 2132290 ~ 2134865 (-) False LOC122351111
TU89525 lncRNA upstream 7949 2132290 ~ 2156393 (-) False LOC122351111
XM_043246916.1 mRNA downstream 34765 2082041 ~ 2089293 (-) True slc25a25a
XM_043246169.1 mRNA downstream 42555 2076147 ~ 2081503 (-) True zdhhc12a
XM_043247301.1 mRNA downstream 48462 2071889 ~ 2075596 (-) True seta
XM_043247583.1 mRNA downstream 62592 2059587 ~ 2061466 (-) False c8h22orf39
XM_043247564.1 mRNA downstream 68875 2046116 ~ 2055183 (-) True acaa2
XM_043247584.1 mRNA upstream 10867 2135208 ~ 2138080 (-) True LOC122350843
XM_043247988.1 mRNA upstream 29894 2154235 ~ 2162003 (-) False LOC122351111
XM_043247555.1 mRNA upstream 279869 2404210 ~ 2419714 (-) False LOC122350819
XM_043247554.1 mRNA upstream 279869 2404210 ~ 2406457 (-) False LOC122350819
XM_043247553.1 mRNA upstream 279869 2404210 ~ 2406439 (-) True LOC122350819
TU89500 other downstream 62577 2059394 ~ 2061481 (-) True c8h22orf39
TU89498 other downstream 62723 2059394 ~ 2061335 (-) False c8h22orf39
TU89063 other downstream 337005 1732864 ~ 1787053 (-) False pi4kab
TU89104 other downstream 368674 1749147 ~ 1755384 (-) False LOC122349998
TU89103 other downstream 370142 1749147 ~ 1753916 (-) True LOC122349998
TU89626 other upstream 336590 2460931 ~ 2464371 (-) True G60564
XR_006251678.1 other upstream 399475 2523816 ~ 2552186 (-) False bicdl1
TU89698 other upstream 669793 2794134 ~ 2813107 (-) False rad9b
TU89795 other upstream 908126 3032467 ~ 3035092 (-) True G60679
XR_006251616.1 other upstream 1721112 3845453 ~ 3850590 (-) False lhfpl4b

Expression Profile