RNA id: TU89632



Basic Information


Item Value
RNA id TU89632
length 244
lncRNA type sense_over
GC content 0.55
exon number 2
gene id G60566
representative False

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2506238 ~ 2574004 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactgacagATGCAGGATCTCTGAGAACAGCAGCAGCTACAGGACTGGATTGGGCAGCTGAAGCGCTCCATCATGTCAGGATGGTGTCGTCGATCTCTTCGTTGGAGTCGGGAAGGCCGGAGATCTTCTTCAAGGATCTGCGGTAACATTCTGACAGCAGCTCGTTGCTGGCCGAGTCCAGGATCGCGCTGATGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89604 lncRNA downstream 91968 2410413 ~ 2415501 (-) True G60548
TU89581 lncRNA downstream 168625 2338559 ~ 2338844 (-) True G60542
TU89570 lncRNA downstream 224578 2282538 ~ 2282891 (-) True G60532
TU89568 lncRNA downstream 254379 2249342 ~ 2253090 (-) True G60530
TU89557 lncRNA downstream 339222 2166932 ~ 2168247 (-) True G60519
TU89685 lncRNA upstream 27705 2601709 ~ 2612229 (-) False G60604
TU89684 lncRNA upstream 32820 2606824 ~ 2612229 (-) True G60604
TU89687 lncRNA upstream 34449 2608453 ~ 2609694 (-) False G60604
TU89695 lncRNA upstream 208616 2782620 ~ 2807499 (-) False rad9b
TU89694 lncRNA upstream 230300 2804304 ~ 2813178 (-) False rad9b
XM_043247552.1 mRNA downstream 85296 2420331 ~ 2422173 (-) True LOC122350818
XM_043247555.1 mRNA downstream 87755 2404210 ~ 2419714 (-) False LOC122350819
XM_043247520.1 mRNA upstream 38841 2612845 ~ 2645929 (-) False mtmr3
XM_043247518.1 mRNA upstream 38841 2612845 ~ 2645929 (-) False mtmr3
XM_043247519.1 mRNA upstream 38841 2612845 ~ 2645929 (-) False mtmr3
XM_043247521.1 mRNA upstream 38841 2612845 ~ 2645929 (-) False mtmr3
XM_043247515.1 mRNA upstream 38841 2612845 ~ 2645929 (-) False mtmr3
TU89626 other downstream 43098 2460931 ~ 2464371 (-) True G60564
TU89500 other downstream 445988 2059394 ~ 2061481 (-) True c8h22orf39
TU89498 other downstream 446134 2059394 ~ 2061335 (-) False c8h22orf39
TU89104 other downstream 752085 1749147 ~ 1755384 (-) False LOC122349998
TU89698 other upstream 220130 2794134 ~ 2813107 (-) False rad9b
TU89795 other upstream 458463 3032467 ~ 3035092 (-) True G60679
XR_006251616.1 other upstream 1271449 3845453 ~ 3850590 (-) False lhfpl4b
TU90264 other upstream 1514720 4088724 ~ 4092157 (-) True G60967
TU90343 other upstream 1726988 4300992 ~ 4307499 (-) True G61023

Expression Profile