RNA id: TU89845



Basic Information


Item Value
RNA id TU89845
length 410
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G60719
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 3561009 ~ 3561418 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CACATTATTACCCTTATGTCTTTTGAGAAACATCTTAAGTGTATTTTAAGCATATTCCGATGCTTTCGAAATGACGTGGATCTATTTTTATATCTGCTATTTCTTAAAGCTAGTAACAAGCCTGAGTTTCAATGCAAGATTGCTTGTATTAATGCTTGAAAGTGCATTAATCTCTATTCTGTATTCTCAGCACTCTCTCACCAGCTCGTCTTTCTGGGTCATGTCTTGACTGACGCGTGTCCACTCAATGTCCAGGTCTCCGACATCTGCAACATCCAAGGTGTATGTGCATCCCAGAGTAATACTCTCCCCCTGGGCTTTCTTCACCGTCTGTGGTCCGCTGGATGTCACCTGTATGGCCGAAgctagagacagacagagagagagagagagagagagagagagagaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89740 lncRNA downstream 615078 2945410 ~ 2945931 (-) True G60639
TU89741 lncRNA downstream 617002 2943717 ~ 2944007 (-) True G60640
TU89738 lncRNA downstream 620531 2939280 ~ 2940478 (-) True G60638
TU89699 lncRNA downstream 747902 2804304 ~ 2813107 (-) False rad9b
TU89696 lncRNA downstream 753510 2804304 ~ 2807499 (-) False rad9b
TU89846 lncRNA upstream 1174 3562592 ~ 3563073 (-) True G60720
TU89847 lncRNA upstream 2114 3563532 ~ 3564937 (-) True G60721
TU89848 lncRNA upstream 6398 3567816 ~ 3569810 (-) True G60722
TU89855 lncRNA upstream 18143 3579561 ~ 3579961 (-) True G60729
TU89985 lncRNA upstream 83801 3645219 ~ 3704454 (-) True G60819
XM_043247896.1 mRNA downstream 184827 3209091 ~ 3376182 (-) False LOC122351051
XM_043247895.1 mRNA downstream 184845 3209091 ~ 3376164 (-) False LOC122351051
XM_043247897.1 mRNA downstream 246835 3211489 ~ 3314174 (-) False LOC122351051
XM_043247898.1 mRNA downstream 246835 3297694 ~ 3314174 (-) True LOC122351051
XM_043247448.1 mRNA downstream 469622 3081886 ~ 3091387 (-) True ppp2r2aa
XM_043247732.1 mRNA upstream 21926 3583344 ~ 3636194 (-) True dock5
XM_043247090.1 mRNA upstream 93334 3654752 ~ 3658044 (-) True neflb
XM_043247086.1 mRNA upstream 96766 3658184 ~ 3665189 (-) True si:ch211-255g12.8
XM_043247094.1 mRNA upstream 104496 3665914 ~ 3669338 (-) False asb6
XM_043247095.1 mRNA upstream 104496 3665914 ~ 3669299 (-) True asb6
TU89795 other downstream 525917 3032467 ~ 3035092 (-) True G60679
TU89698 other downstream 747902 2794134 ~ 2813107 (-) False rad9b
XR_006251678.1 other downstream 1008823 2523816 ~ 2552186 (-) False bicdl1
TU89626 other downstream 1096638 2460931 ~ 2464371 (-) True G60564
TU89500 other downstream 1499528 2059394 ~ 2061481 (-) True c8h22orf39
XR_006251616.1 other upstream 284035 3845453 ~ 3850590 (-) False lhfpl4b
TU90264 other upstream 527306 4088724 ~ 4092157 (-) True G60967
TU90343 other upstream 739574 4300992 ~ 4307499 (-) True G61023
TU90417 other upstream 831795 4393213 ~ 4397074 (-) True G61071
TU90966 other upstream 1625897 5187315 ~ 5187916 (-) False LOC122350811

Expression Profile