RNA id: TU90567



Basic Information


Item Value
RNA id TU90567
length 206
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G61186
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 4866981 ~ 4867186 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAGccatatgcaaataatttttgtgcaaaaatgcagaCAATTGTACTTACTGTTTGCGCACATGTGCCAAAGCATTCGCAATTTGCtcaaatcaataagaaattCTAATCTGATGTGAAAAAGAAGCTAATTGTTTAGAGATCTGaacttattgttttgaaaaattaaaatttcattcgagaattgagccaaagcaattgagaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU90564 lncRNA downstream 13525 4852279 ~ 4853456 (-) True G61183
TU90549 lncRNA downstream 40042 4824014 ~ 4826939 (-) True G61170
TU90507 lncRNA downstream 126780 4738154 ~ 4740201 (-) True G61135
TU90469 lncRNA downstream 193981 4672173 ~ 4673000 (-) True G61114
TU90433 lncRNA downstream 392298 4474442 ~ 4474683 (-) True G61083
TU90570 lncRNA upstream 9774 4876960 ~ 4885431 (-) True G61188
TU90582 lncRNA upstream 41654 4908840 ~ 4909470 (-) True G61196
TU90596 lncRNA upstream 66383 4933569 ~ 4933797 (-) True G61209
XR_006251549.1 lncRNA upstream 82447 4949633 ~ 4955156 (-) True LOC122349981
TU90599 lncRNA upstream 85869 4953055 ~ 4953446 (-) True G61212
XM_043247543.1 mRNA downstream 6680 4853786 ~ 4860301 (-) True si:dkey-8e10.3
XM_043247745.1 mRNA downstream 177501 4674326 ~ 4689480 (-) False ptpn18
XM_043247744.1 mRNA downstream 177503 4674326 ~ 4689478 (-) True ptpn18
XM_043247747.1 mRNA downstream 177639 4674326 ~ 4689342 (-) False ptpn18
XM_043247746.1 mRNA downstream 180279 4674326 ~ 4686702 (-) False ptpn18
XM_043247542.1 mRNA upstream 320068 5187254 ~ 5187921 (-) True LOC122350811
XM_043246081.1 mRNA upstream 328566 5195752 ~ 5207454 (-) True LOC122349940
XM_043247304.1 mRNA upstream 474208 5341394 ~ 5351279 (-) False nr1h5
XM_043247303.1 mRNA upstream 474208 5341394 ~ 5351272 (-) True nr1h5
XM_043247863.1 mRNA upstream 486433 5353619 ~ 5361985 (-) True slc66a1
TU90417 other downstream 469907 4393213 ~ 4397074 (-) True G61071
TU90343 other downstream 559482 4300992 ~ 4307499 (-) True G61023
TU90264 other downstream 774824 4088724 ~ 4092157 (-) True G60967
XR_006251616.1 other downstream 1016391 3845453 ~ 3850590 (-) False lhfpl4b
TU89795 other downstream 1831889 3032467 ~ 3035092 (-) True G60679
TU90966 other upstream 320129 5187315 ~ 5187916 (-) False LOC122350811
TU90968 other upstream 329425 5196611 ~ 5197889 (-) False LOC122349940
TU90970 other upstream 335312 5202498 ~ 5207522 (-) False LOC122349940
XR_006251611.1 other upstream 474547 5341733 ~ 5351276 (-) False nr1h5
XR_006251650.1 other upstream 609027 5476213 ~ 5510943 (-) False pip5k1bb

Expression Profile