RNA id: TU92189



Basic Information


Item Value
RNA id TU92189
length 262
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G62239
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8913482 ~ 8914004 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CATTACCAGGCCCAGAAGAATCCTCGACATTGTAGATTTCCCATGTAACACAAGTGCCAGGGCTTTAGGCTCATTTGCTAACGTTTCCCTAAAGTAAAGAGAGTTATTCGCATAGCGGCGTAAAATATAAACCGACGTATTTGCAAAGCATAATCGCGTAAATCTGCGGTCAGTAACCTCTTGTGAGCTGTTTGTTTTCTCGCGCGTAAGGCATTCCCACAAACAGTGTGATAATGTAGACTGGCGACGACCGATGCGTAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92069 lncRNA downstream 173529 8712223 ~ 8739953 (-) False LOC122350893
XR_006251637.1 lncRNA downstream 173551 8712037 ~ 8739931 (-) True LOC122350893
TU92070 lncRNA downstream 200050 8712223 ~ 8713432 (-) False LOC122350893
TU91990 lncRNA downstream 405359 8507891 ~ 8508123 (-) True G62120
TU91913 lncRNA downstream 483347 8427285 ~ 8430135 (-) True G62076
TU92177 lncRNA upstream 4754 8918758 ~ 8920904 (-) True G62235
TU92191 lncRNA upstream 7477 8921481 ~ 8921696 (-) True G62241
TU92194 lncRNA upstream 22074 8936078 ~ 8942201 (-) False LOC122351086
XR_006251681.1 lncRNA upstream 24314 8938318 ~ 8942255 (-) True LOC122351086
TU92212 lncRNA upstream 54285 8968289 ~ 8972773 (-) True G62255
XM_043246733.1 mRNA downstream 1495 8820356 ~ 8911987 (-) True prkcz
XM_043246734.1 mRNA downstream 1500 8820356 ~ 8911982 (-) False prkcz
XM_043246731.1 mRNA downstream 3504 8820356 ~ 8909978 (-) False prkcz
XM_043246737.1 mRNA downstream 15446 8820356 ~ 8898036 (-) False prkcz
XM_043246736.1 mRNA downstream 32245 8820356 ~ 8881237 (-) False prkcz
XM_043246899.1 mRNA upstream 8689 8922693 ~ 8934751 (-) False st6galnac5b
XM_043246900.1 mRNA upstream 8689 8922693 ~ 8934744 (-) True st6galnac5b
XM_043246901.1 mRNA upstream 8689 8922693 ~ 8933840 (-) False st6galnac5b
XM_043247484.1 mRNA upstream 58789 8972793 ~ 8975940 (-) True LOC122350776
XM_043247006.1 mRNA upstream 77339 8991343 ~ 9001962 (-) True tnni3k
XR_006251592.1 other downstream 256196 8652426 ~ 8657286 (-) False pola2
TU92042 other downstream 263517 8647281 ~ 8649965 (-) False mrps36
TU92043 other downstream 263517 8647281 ~ 8649965 (-) True mrps36
XR_006251693.1 other downstream 483708 8429694 ~ 8429774 (-) True LOC122351130
XR_006251694.1 other downstream 483938 8429474 ~ 8429544 (-) True LOC122351131
XR_006251623.1 other upstream 343948 9257952 ~ 9262826 (-) False mindy4
TU92748 other upstream 1040746 9954750 ~ 9961701 (-) False mllt1a
TU92747 other upstream 1047793 9961797 ~ 9969485 (-) False mllt1a
TU92903 other upstream 1475179 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 1526760 10440764 ~ 10478685 (-) False G62826

Expression Profile