RNA id: TU92191



Basic Information


Item Value
RNA id TU92191
length 216
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G62241
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8921481 ~ 8921696 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAATTGTTGTCGACTAAAGATCAgtactgccatctagtggcacTTTTCTAGTTGTACCTTTGCAACAGTGATTGTTATTCACTTATAGCAGTAACAATGCTGGTAGaattttaataacagtaattatagtattgtaataattatattcatgTGTATAGTAATACGCACGGCACTCATTTAGTTAAATGTTAATCCTGTTTTGCTATACCATCAGTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92177 lncRNA downstream 577 8918758 ~ 8920904 (-) True G62235
TU92189 lncRNA downstream 7477 8913482 ~ 8914004 (-) True G62239
TU92069 lncRNA downstream 181528 8712223 ~ 8739953 (-) False LOC122350893
XR_006251637.1 lncRNA downstream 181550 8712037 ~ 8739931 (-) True LOC122350893
TU92070 lncRNA downstream 208049 8712223 ~ 8713432 (-) False LOC122350893
TU92194 lncRNA upstream 14382 8936078 ~ 8942201 (-) False LOC122351086
XR_006251681.1 lncRNA upstream 16622 8938318 ~ 8942255 (-) True LOC122351086
TU92212 lncRNA upstream 46593 8968289 ~ 8972773 (-) True G62255
TU92222 lncRNA upstream 84859 9006555 ~ 9006779 (-) True G62262
TU92223 lncRNA upstream 85138 9006834 ~ 9007105 (-) True G62263
XM_043246733.1 mRNA downstream 9494 8820356 ~ 8911987 (-) True prkcz
XM_043246734.1 mRNA downstream 9499 8820356 ~ 8911982 (-) False prkcz
XM_043246731.1 mRNA downstream 11503 8820356 ~ 8909978 (-) False prkcz
XM_043246737.1 mRNA downstream 23445 8820356 ~ 8898036 (-) False prkcz
XM_043246736.1 mRNA downstream 40244 8820356 ~ 8881237 (-) False prkcz
XM_043246899.1 mRNA upstream 997 8922693 ~ 8934751 (-) False st6galnac5b
XM_043246900.1 mRNA upstream 997 8922693 ~ 8934744 (-) True st6galnac5b
XM_043246901.1 mRNA upstream 997 8922693 ~ 8933840 (-) False st6galnac5b
XM_043247484.1 mRNA upstream 51097 8972793 ~ 8975940 (-) True LOC122350776
XM_043247006.1 mRNA upstream 69647 8991343 ~ 9001962 (-) True tnni3k
XR_006251592.1 other downstream 264195 8652426 ~ 8657286 (-) False pola2
TU92042 other downstream 271516 8647281 ~ 8649965 (-) False mrps36
TU92043 other downstream 271516 8647281 ~ 8649965 (-) True mrps36
XR_006251693.1 other downstream 491707 8429694 ~ 8429774 (-) True LOC122351130
XR_006251694.1 other downstream 491937 8429474 ~ 8429544 (-) True LOC122351131
XR_006251623.1 other upstream 336256 9257952 ~ 9262826 (-) False mindy4
TU92748 other upstream 1033054 9954750 ~ 9961701 (-) False mllt1a
TU92747 other upstream 1040101 9961797 ~ 9969485 (-) False mllt1a
TU92903 other upstream 1467487 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 1519068 10440764 ~ 10478685 (-) False G62826

Expression Profile