RNA id: TU93477



Basic Information


Item Value
RNA id TU93477
length 315
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G63134
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11667166 ~ 11667480 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GATCGAAACAGGTCGGAGAAGGGAGGCGTGCAGGGGATGACATTCAGCGCACCCATGGTCTCCAGAATTCCACTCTGTAGTCCACAAAGGACCAGGATGACAATGATGCAAATAAACTTGGCACGAAGACCATATCCAGGCAAAGCCTTTTTTGTGGCTTTATAAAAAAGCAGGTAGCCATAGAACGACAGAAAGGTCGATATGGCAATGATGGCATTGACATACATGTTGAGATTAACTGAATTCACCTAAGGGAAACAGATTATGAAGAGTCACATAATGTAGTtcaaaaaataagtcaaatctATTTttcaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93470 lncRNA downstream 2392 11663435 ~ 11664774 (-) True G63127
TU93463 lncRNA downstream 15262 11648509 ~ 11651904 (-) True G63120
XR_006251589.1 lncRNA downstream 45961 11620447 ~ 11621205 (-) True LOC122350252
TU93425 lncRNA downstream 51241 11562278 ~ 11615925 (-) True G63095
TU93423 lncRNA downstream 102761 11562278 ~ 11564405 (-) False G63095
TU93660 lncRNA upstream 153804 11821284 ~ 11823244 (-) True G63254
TU93661 lncRNA upstream 153804 11821284 ~ 11823244 (-) False G63254
TU93738 lncRNA upstream 188265 11855745 ~ 11856062 (-) True G63304
TU93792 lncRNA upstream 349246 12016726 ~ 12017351 (-) True G63344
TU93795 lncRNA upstream 352231 12019711 ~ 12019953 (-) True G63347
XM_043246446.1 mRNA downstream 51895 11579162 ~ 11615271 (-) True nol4la
XM_043246480.1 mRNA downstream 91953 11569548 ~ 11575213 (-) False ptk6a
XM_043246479.1 mRNA downstream 91971 11569548 ~ 11575195 (-) True ptk6a
XM_043246486.1 mRNA downstream 163134 11481644 ~ 11504032 (-) True si:dkey-70p6.1
XM_043247378.1 mRNA downstream 215720 11445273 ~ 11451446 (-) True emilin3a
XM_043246525.1 mRNA upstream 7794 11675274 ~ 11683625 (-) True gpr173
XM_043246489.1 mRNA upstream 75659 11743139 ~ 11747881 (-) True wasb
XM_043246488.1 mRNA upstream 75659 11743139 ~ 11747879 (-) False wasb
XM_043246487.1 mRNA upstream 75659 11743139 ~ 11747878 (-) False wasb
XM_043246496.1 mRNA upstream 82116 11749596 ~ 11764650 (-) False slc38a5b
TU93421 other downstream 102761 11562278 ~ 11564405 (-) False G63095
TU93424 other downstream 102761 11562278 ~ 11564405 (-) False G63095
TU93426 other downstream 102761 11562278 ~ 11564405 (-) False G63095
TU93259 other downstream 321308 11323904 ~ 11345858 (-) False LOC122350269
TU93213 other downstream 535959 11097002 ~ 11131207 (-) False LOC122349915
TU93692 other upstream 110791 11778271 ~ 11779251 (-) True G63274
unassigned_transcript_1295 other upstream 129650 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93842 other upstream 596214 12263694 ~ 12264533 (-) True G63385
XR_006251575.1 other upstream 683766 12351246 ~ 12363095 (-) False kcnq2a
TU94636 other upstream 2141948 13809428 ~ 13863250 (-) True G63933

Expression Profile