RNA id: TU93777



Basic Information


Item Value
RNA id TU93777
length 779
lncRNA type read_through
GC content 0.37
exon number 2
gene id G63329
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12159189 ~ 12198367 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TAGAGTTCATTTTGGCTTCTGCCGGATCCATATCATGGTCATCTTCGAACACGTCTTCCTGTTGTCTCTGTTTTGGATGTGAATCAGAATACCTCTGTGACATCCACCCGTATGCGTCTCGACTGGCATGCCGACAAACCTGGCAGGCAGCGGGTCCTGGGAAAAgggccagtttggtggccaacATATGGGCCATTCTCCACGGCGTGCCCATTCTGTACAGTCACAAAGACATCTAAAATTGCAGTTGAATccaatataaaaagtaatatttacacTTAATATCTATTAAGAGCCTGAAGAAAAATCTGAAGAGAAGAGTACACTGAAAGAACAggaattatttcaataaaaatacattgtcaaagttttttttcatgcactgatatattttactGGCTGTTAACAGTGATAACGAGAGATATCCAGAAACCCCTCAGTAAAAAACTTAAACCtttggcaaaataaaacaaagaattcTGAACCTAGTTTTATGCAATCTTCAGATTTCTCTTCTGTCAGTGTATGCAAGTGAATTGTATAATGCatcatatgcatttttaaacaaagcatttCAAAAAACATGTCAAACAACCGTTTTAATGTATTGTGATTAATCAACTGGGAAAGTACGAAACATGGGAaaggtaattttatttaatttacaaaaactttacTCTGGtgtaaattgtattattttacgaAACACAACTTAAGGACAAGATGACAGGCCCAGGCGTTTCGCATGATTGAATAGCTTTTTGccttgcataaaataa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93769 lncRNA downstream 19791 12104578 ~ 12139398 (-) True G63321
TU93764 lncRNA downstream 24461 12131491 ~ 12134728 (-) True G63316
TU93808 lncRNA downstream 104659 12053131 ~ 12054530 (-) False prok1
TU93778 lncRNA downstream 106210 12051357 ~ 12052979 (-) True prok1
TU93798 lncRNA downstream 136436 12022515 ~ 12022753 (-) True G63350
TU93864 lncRNA upstream 104361 12302728 ~ 12304329 (-) True G63395
TU93874 lncRNA upstream 134089 12332456 ~ 12334605 (-) True G63404
TU93877 lncRNA upstream 137399 12335766 ~ 12336021 (-) True G63406
TU93878 lncRNA upstream 137747 12336114 ~ 12336823 (-) True G63407
TU93879 lncRNA upstream 138509 12336876 ~ 12337194 (-) True G63408
XM_043246535.1 mRNA downstream 67527 12085919 ~ 12091662 (-) True alx3
XM_043246423.1 mRNA downstream 76151 12078239 ~ 12083038 (-) True rbm15
XM_043246585.1 mRNA downstream 105196 12051418 ~ 12053993 (-) False prok1
XM_043246544.1 mRNA downstream 146039 12010488 ~ 12013150 (-) True zgc:110353
XM_043246540.1 mRNA downstream 175880 11977200 ~ 11983309 (-) True adora1b
XM_043246424.1 mRNA upstream 1244 12199611 ~ 12213569 (-) True sort1b
XM_043246481.1 mRNA upstream 30325 12228692 ~ 12235738 (-) True amigo1
XM_043246541.1 mRNA upstream 77740 12276107 ~ 12282715 (-) True gnat2
XM_043246455.1 mRNA upstream 117349 12315716 ~ 12324419 (-) True eps8l3b
XM_043246557.1 mRNA upstream 126418 12324785 ~ 12327978 (-) True atp5pb
unassigned_transcript_1295 other downstream 361987 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 379938 11778271 ~ 11779251 (-) True G63274
TU93421 other downstream 594784 11562278 ~ 11564405 (-) False G63095
TU93842 other upstream 65327 12263694 ~ 12264533 (-) True G63385
XR_006251575.1 other upstream 152879 12351246 ~ 12363095 (-) False kcnq2a
TU94636 other upstream 1611061 13809428 ~ 13863250 (-) True G63933
XR_006251614.1 other upstream 2525841 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 2581164 14779531 ~ 14781710 (-) True G64228

Expression Profile