RNA id: TU93842



Basic Information


Item Value
RNA id TU93842
length 731
RNA type TUCP
GC content 0.44
exon number 2
gene id G63385
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12263694 ~ 12264533 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGAATAATGTTCAACAGGTTGTCGATCTTTGTTCTACACTCtgtgaaatatttcattaagCTGTTTTCAATTTTAACACGGCAAGCTGACTTTTTGAAGCGCTTCGCATTAGCGAAGGCAATCGACAAGCGATtcgtgaaagaaaaaaacaacaacaacacagaaaaaaaGTCCCGGTCAATCATCTTACTCCTCTCCATCGCTGCTTTATCTTCAGCACTTAACGTGCAACCCATTTTGCAAAACGTTTATAAACGATTAAAGGGAACCTTTAAAACTGGACGTTGCGGTAATGTTCCTTCACCTTGACGGATAACGAAGCCGAGCAGAGAAAAGGCGTTGGCGGGTTCGCACGAGACGATGCCAGCGTATGAAAACAGatactttaaaacatatttaaacggCGGGGTCTTGTAACATCGAGCTTAAACCGGACCGAGATCCACCGAAACTACATCGGTCGGGGACAGAGCAGAGGATCCAAAACCACAAAGCCAGATGAACAATGTTTCCGTGACTAAAAAGTTTCCACCGCTGGTGTTCTGCGGTCTGCTGTTGAACGCCGGTTTAAGTTTTTTTCACGCAAAAACGGTATCCAAGACTGTATCCAAAACATGTAGCTAAATGTCTCGCGGTGGATCGCAGTTAGAGCCCCTAACGAATcggtgtttttgaacaaatcttttaaatgaacGAATCGTTCTCGTTGCGCGCATTGACTCGTTCTCCGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93777 lncRNA downstream 65327 12159189 ~ 12198367 (-) True G63329
TU93769 lncRNA downstream 124296 12104578 ~ 12139398 (-) True G63321
TU93764 lncRNA downstream 128966 12131491 ~ 12134728 (-) True G63316
TU93808 lncRNA downstream 209164 12053131 ~ 12054530 (-) False prok1
TU93778 lncRNA downstream 210715 12051357 ~ 12052979 (-) True prok1
TU93864 lncRNA upstream 38195 12302728 ~ 12304329 (-) True G63395
TU93874 lncRNA upstream 67923 12332456 ~ 12334605 (-) True G63404
TU93877 lncRNA upstream 71233 12335766 ~ 12336021 (-) True G63406
TU93878 lncRNA upstream 71581 12336114 ~ 12336823 (-) True G63407
TU93879 lncRNA upstream 72343 12336876 ~ 12337194 (-) True G63408
XM_043246481.1 mRNA downstream 27956 12228692 ~ 12235738 (-) True amigo1
XM_043246424.1 mRNA downstream 50125 12199611 ~ 12213569 (-) True sort1b
XM_043246526.1 mRNA downstream 66459 12191538 ~ 12197235 (-) False nfyal
XM_043246533.1 mRNA downstream 66460 12190007 ~ 12197234 (-) False nfyal
XM_043246530.1 mRNA downstream 66460 12190007 ~ 12197234 (-) False nfyal
XM_043246541.1 mRNA upstream 11574 12276107 ~ 12282715 (-) True gnat2
XM_043246455.1 mRNA upstream 51183 12315716 ~ 12324419 (-) True eps8l3b
XM_043246557.1 mRNA upstream 60252 12324785 ~ 12327978 (-) True atp5pb
XM_043246410.1 mRNA upstream 77627 12342160 ~ 12363089 (-) False kcnq2a
XM_043246408.1 mRNA upstream 77627 12342160 ~ 12363089 (-) True kcnq2a
unassigned_transcript_1295 other downstream 466492 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 484443 11778271 ~ 11779251 (-) True G63274
TU93421 other downstream 699289 11562278 ~ 11564405 (-) False G63095
TU93424 other downstream 699289 11562278 ~ 11564405 (-) False G63095
TU93426 other downstream 699289 11562278 ~ 11564405 (-) False G63095
XR_006251575.1 other upstream 86713 12351246 ~ 12363095 (-) False kcnq2a
TU94636 other upstream 1544895 13809428 ~ 13863250 (-) True G63933
XR_006251614.1 other upstream 2459675 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 2514998 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 3019328 15283861 ~ 15284130 (-) True G64353

Expression Profile