RNA id: TU93879



Basic Information


Item Value
RNA id TU93879
length 319
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G63408
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12336876 ~ 12337194 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


caaaaaaatgcttaaatagtGTAGTAATAAACAActtgtttttcataaaaaagcataatacaatataagatgaaagcttttattttccattatcTGTTCACATGTTCTTTTTGTGCTATCAGTGCAATATCATGCAAATAATGATATACTATTAGTATTGATACTTTTagttcatattttgattttgatcatTTCATAGTTCATGGCGCATGAGGTAGCGATGGTTTGCTTTTAAATCCACCTCTACAGGATAGTGGTCACTGACTTCCAAAGCCTgggtgcaaaaaaagaaagacatttcaAGCATTTTGTAATACAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93878 lncRNA downstream 53 12336114 ~ 12336823 (-) True G63407
TU93877 lncRNA downstream 855 12335766 ~ 12336021 (-) True G63406
TU93874 lncRNA downstream 2271 12332456 ~ 12334605 (-) True G63404
TU93864 lncRNA downstream 32547 12302728 ~ 12304329 (-) True G63395
TU93777 lncRNA downstream 138509 12159189 ~ 12198367 (-) True G63329
TU94000 lncRNA upstream 118854 12456048 ~ 12458857 (-) True G63486
TU94006 lncRNA upstream 153083 12490277 ~ 12491882 (-) True G63490
TU94009 lncRNA upstream 162564 12499758 ~ 12504153 (-) False foxp3a
TU94134 lncRNA upstream 311448 12648642 ~ 12649214 (-) True G63578
TU94135 lncRNA upstream 313089 12650283 ~ 12652814 (-) False G63579
XM_043246557.1 mRNA downstream 8898 12324785 ~ 12327978 (-) True atp5pb
XM_043246455.1 mRNA downstream 12457 12315716 ~ 12324419 (-) True eps8l3b
XM_043246541.1 mRNA downstream 54161 12276107 ~ 12282715 (-) True gnat2
XM_043246481.1 mRNA downstream 101138 12228692 ~ 12235738 (-) True amigo1
XM_043246424.1 mRNA downstream 123307 12199611 ~ 12213569 (-) True sort1b
XM_043246410.1 mRNA upstream 4966 12342160 ~ 12363089 (-) False kcnq2a
XM_043246408.1 mRNA upstream 4966 12342160 ~ 12363089 (-) True kcnq2a
XM_043246412.1 mRNA upstream 4966 12342160 ~ 12363088 (-) False kcnq2a
XM_043246413.1 mRNA upstream 4966 12342160 ~ 12363088 (-) False kcnq2a
XM_043246414.1 mRNA upstream 4966 12342160 ~ 12363088 (-) False kcnq2a
TU93842 other downstream 72343 12263694 ~ 12264533 (-) True G63385
unassigned_transcript_1295 other downstream 539674 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 557625 11778271 ~ 11779251 (-) True G63274
TU93424 other downstream 772471 11562278 ~ 11564405 (-) False G63095
XR_006251575.1 other upstream 14052 12351246 ~ 12363095 (-) False kcnq2a
TU94636 other upstream 1472234 13809428 ~ 13863250 (-) True G63933
XR_006251614.1 other upstream 2387014 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 2442337 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 2946667 15283861 ~ 15284130 (-) True G64353

Expression Profile